Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P20
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   1.9  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   2.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   3.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   3.3  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   7.5  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   7.5  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 38  SGLSSARQQKKSVAHYXFLYWN 103
           SGL+  +++K S++HY  LY N
Sbjct: 447 SGLNLEQEKKDSISHY-HLYTN 467


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 358 RCSPGFRVSQASAGELHVPCSCC 290
           RCS   +VS +   ++   C CC
Sbjct: 56  RCSSYLQVSGSKIWQMERSCMCC 78


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 352 SNEDQVFEHFDCLFSSSESDSIH 420
           SN D+V  + + + S+S S+S+H
Sbjct: 24  SNSDRVRGNGNAIVSNSASNSVH 46


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 352 SNEDQVFEHFDCLFSSSESDSIH 420
           SN D+V  + + + S+S S+S+H
Sbjct: 25  SNSDRVRGNGNAIVSNSASNSVH 47


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 298 SCCIYRSGRCCVHRTPGVLCVLCIFSGC 215
           S C  R  R C +  P  LC+     GC
Sbjct: 44  SRCDGRCQRFCPNVVPKPLCIKICAPGC 71


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -3

Query: 298 SCCIYRSGRCCVHRTPGVLCVLCIFSGC 215
           S C  R  R C +  P  LC+     GC
Sbjct: 44  SRCDGRCQRFCPNVVPKPLCIKICAPGC 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,335
Number of Sequences: 438
Number of extensions: 1235
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)