Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P18
         (572 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0928 + 12464325-12464498,12466494-12466679,12466929-124670...    28   4.6  
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98...    28   6.1  
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257...    27   8.0  
02_05_1355 - 35878060-35878257,35879455-35879691,35880089-35880217     27   8.0  
01_07_0122 - 41196081-41196205,41197561-41198245,41198961-411993...    27   8.0  

>03_02_0928 +
           12464325-12464498,12466494-12466679,12466929-12467021,
           12467212-12467394,12467506-12467608,12467695-12467865,
           12468086-12469084,12469178-12469254,12469485-12470337,
           12470878-12471000,12471526-12471878
          Length = 1104

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 223 NKQMGRTDYNSNAHKKHMLFVRLHRKHTYNKITN 324
           NK++     N+N HK+H+ FVR   +  YN++ +
Sbjct: 832 NKKLAAKQINNN-HKEHLSFVRDPEQMPYNQVNS 864


>10_01_0076 -
           987092-987671,987747-987812,988201-988363,988467-988548,
           989153-989202,989237-989270,990177-990239,990339-990403,
           990485-990560,991274-991353,991514-991628,991729-991830
          Length = 491

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 432 Y*TNR*PQHIKQYLRSQV*NGGSRIPRSAHNHNDGHYQYH 551
           Y T R  +H  +Y + Q  N     P     +++G YQYH
Sbjct: 444 YETERSKRHEHEYYQMQPNNTEPEGPEEGEAYDEGDYQYH 483


>06_01_0358 +
           2573241-2573324,2573509-2573636,2573769-2573971,
           2574129-2574254,2574522-2574680,2574857-2575050,
           2575251-2575376
          Length = 339

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
 Frame = +1

Query: 328 PYLHHTSEYKIEFTKRFHFHW---ELWSDT 408
           P +HH  ++K       HF W   E+W DT
Sbjct: 159 PNVHHLDQFKNAANPEAHFVWTGPEIWKDT 188


>02_05_1355 - 35878060-35878257,35879455-35879691,35880089-35880217
          Length = 187

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 537 DRRCGCVLTWESYFRHFTPVNVDIVLY 457
           +R  G   +WE+  RH+  ++V +VLY
Sbjct: 113 ERTSGYATSWENSIRHYGRLHVSMVLY 139


>01_07_0122 -
           41196081-41196205,41197561-41198245,41198961-41199329,
           41199405-41199514,41200539-41200833
          Length = 527

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 459 IKQYLRSQV*NGG-SRIPRSAHNHNDGHYQYH 551
           +  YLR  + +GG S  P  A  H+ GH+ +H
Sbjct: 326 LSSYLRHSLHSGGGSEAPSPAPMHHHGHHHHH 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,515,232
Number of Sequences: 37544
Number of extensions: 321888
Number of successful extensions: 587
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)