Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P16
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 249 5e-66
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 249 5e-66
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 249 5e-66
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 249 5e-66
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 249 5e-66
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 249 5e-66
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 246 5e-65
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 73 1e-12
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 32 1.9
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 249 bits (610), Expect = 5e-66
Identities = 113/160 (70%), Positives = 137/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRAHGRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKP 160
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 246 bits (602), Expect = 5e-65
Identities = 112/160 (70%), Positives = 136/160 (85%), Gaps = 1/160 (0%)
Frame = -2
Query: 569 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF 390
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PF
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 389 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVN 210
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+NAESNA+ K LDVD LVI+HIQVN
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVN 120
Query: 209 RAPCLRRRTYRAHGRINPYMSXPCHIE-VXTQRTRRCXRP 93
+AP +RRRTYRA GRINPYMS PCHIE + T++ + +P
Sbjct: 121 KAPKMRRRTYRARGRINPYMSSPCHIEMILTEKEQIVPKP 160
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/72 (47%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -2
Query: 320 PKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSXP 141
PK+ F L+ +SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 140 CHIE-VXTQRTR 108
CHIE + T++ +
Sbjct: 80 CHIEMILTEKNK 91
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 246 RGQASHRPHSGKSRALPTQTYIPCSRSHQPLHVXSLPH 133
R +S R HS S+ L +Q++ P SRSH P PH
Sbjct: 89 RACSSRRAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPH 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,198,299
Number of Sequences: 237096
Number of extensions: 1632401
Number of successful extensions: 7545
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7545
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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