Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P13
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-9|AAK27865.1| 275|Caenorhabditis elegans Mitochondrial... 266 1e-71
U28940-7|AAA68353.2| 294|Caenorhabditis elegans Mitochondrial p... 170 7e-43
Z81072-4|CAB03018.2| 327|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U29378-3|AAA68723.2| 330|Caenorhabditis elegans Stomatin protei... 34 0.089
U29378-2|ABS19471.1| 325|Caenorhabditis elegans Stomatin protei... 34 0.089
AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.16
U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protei... 32 0.47
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 2.5
Z66500-5|CAA91306.1| 168|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 29 4.4
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 4.4
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 29 4.4
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 4.4
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 4.4
Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical pr... 28 5.8
U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine rece... 28 5.8
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 28 5.8
Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AC087079-9|AAK27865.1| 275|Caenorhabditis elegans Mitochondrial
prohibitin complexprotein 1 protein.
Length = 275
Score = 266 bits (652), Expect = 1e-71
Identities = 132/177 (74%), Positives = 155/177 (87%)
Frame = -3
Query: 718 ILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDS 539
IL RP PD+LP IY +G+DY ERVLPSIT+EVLKAVVAQFDA E+ITQRE+VSQ+ + +
Sbjct: 97 ILHRPSPDRLPNIYLNIGLDYAERVLPSITNEVLKAVVAQFDAHEMITQREVVSQRASVA 156
Query: 538 LTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIA 359
L ERAAQFGL+LDDI+ITHL FG+EFT+AVE+KQVAQQEAEKAR+LVEKAEQ K AAV
Sbjct: 157 LRERAAQFGLLLDDIAITHLNFGREFTEAVEMKQVAQQEAEKARYLVEKAEQMKIAAVTT 216
Query: 358 AEGDAQAAVLLAKSFGSAGEGLVELRRIEAAEDIAYQLAKSRNVTYLPHGQNVLLNL 188
AEGDAQAA LLAK+F SAG+GLVELR+IEAAE+IA ++AK++NVTYLP Q LLNL
Sbjct: 217 AEGDAQAAKLLAKAFASAGDGLVELRKIEAAEEIAERMAKNKNVTYLPGNQQTLLNL 273
>U28940-7|AAA68353.2| 294|Caenorhabditis elegans Mitochondrial
prohibitin complexprotein 2 protein.
Length = 294
Score = 170 bits (414), Expect = 7e-43
Identities = 88/177 (49%), Positives = 128/177 (72%)
Frame = -3
Query: 718 ILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDS 539
+L RP P+ L IY LG +++ERVLPSI +EVLK VVA+F+A +LITQR+ VS V +
Sbjct: 107 VLSRPNPEHLVHIYRTLGQNWEERVLPSICNEVLKGVVAKFNASQLITQRQQVSMLVRKT 166
Query: 538 LTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIA 359
L ERA F +ILDD+S+T L F +++ AVE KQVA QEA++A F VE+A+QQK+ ++
Sbjct: 167 LIERALDFNIILDDVSLTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQ 226
Query: 358 AEGDAQAAVLLAKSFGSAGEGLVELRRIEAAEDIAYQLAKSRNVTYLPHGQNVLLNL 188
AEG+A++A LL ++ + G ++LR+I AA+ IA +++S N TYLP G ++LN+
Sbjct: 227 AEGEAESAKLLGEAMKN-DPGFLKLRKIRAAQKIARIVSESGNKTYLPTG-GLMLNI 281
>Z81072-4|CAB03018.2| 327|Caenorhabditis elegans Hypothetical
protein F30A10.5 protein.
Length = 327
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/134 (18%), Positives = 69/134 (51%)
Frame = -3
Query: 718 ILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDS 539
+L+ V D G+D E + + +++ V + + + +RE++++ + +
Sbjct: 104 VLYLRVFDPYKACDASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKERELLNENIVFA 163
Query: 538 LTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIA 359
+ + +A +G+ I + + +A++++ A++ K R + ++E ++AA+
Sbjct: 164 INKASAPWGIQCMRYEIRDMQMPSKIQEAMQMQVEAER---KKRAAILESEGIREAAINR 220
Query: 358 AEGDAQAAVLLAKS 317
AEGD ++A+L +++
Sbjct: 221 AEGDKKSAILASEA 234
>U29378-3|AAA68723.2| 330|Caenorhabditis elegans Stomatin protein
1, isoform a protein.
Length = 330
Score = 34.3 bits (75), Expect = 0.089
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = -3
Query: 682 IYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLIL 503
I +++G+ + L+ ++ E+++ RE +S + SL E +G+ +
Sbjct: 139 ITSVVGVGNATDSTKLLAQTTLRTILGTHTLSEILSDREKISADMKISLDEATEPWGIKV 198
Query: 502 DDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLA 323
+ + + + + +A+ + A ++A A +IAAEG+ +A+ LA
Sbjct: 199 ERVELRDVRLPSQMQRAMAAEAEATRDAG--------------AKIIAAEGELRASAALA 244
Query: 322 K--SFGSAGEGLVELRRIEAAEDIA 254
+ + S EG ++LR + I+
Sbjct: 245 EAATIISKSEGAMQLRYLHTLNAIS 269
>U29378-2|ABS19471.1| 325|Caenorhabditis elegans Stomatin protein
1, isoform b protein.
Length = 325
Score = 34.3 bits (75), Expect = 0.089
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = -3
Query: 682 IYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLIL 503
I +++G+ + L+ ++ E+++ RE +S + SL E +G+ +
Sbjct: 139 ITSVVGVGNATDSTKLLAQTTLRTILGTHTLSEILSDREKISADMKISLDEATEPWGIKV 198
Query: 502 DDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLA 323
+ + + + + +A+ + A ++A A +IAAEG+ +A+ LA
Sbjct: 199 ERVELRDVRLPSQMQRAMAAEAEATRDAG--------------AKIIAAEGELRASAALA 244
Query: 322 K--SFGSAGEGLVELRRIEAAEDIA 254
+ + S EG ++LR + I+
Sbjct: 245 EAATIISKSEGAMQLRYLHTLNAIS 269
>AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical
protein Y71H9A.2 protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/143 (20%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Frame = -3
Query: 676 TILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLILDD 497
+++ I+ R + L+ ++ E+++ R+++S ++ +L E +G+ ++
Sbjct: 133 SVINIEDAARSTKLLAQTTLRNILGTKTLTEMLSDRDVISLQMQATLDETTIPWGVKVER 192
Query: 496 ISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLAKS 317
+ + K+ +L++V EAE R + K +IAAEG+ A+ LA++
Sbjct: 193 VEM------KDVRLPYQLQRVMAAEAEATRDAMAK--------IIAAEGEKNASTALAEA 238
Query: 316 FG--SAGEGLVELRRIEAAEDIA 254
S ++LR ++ I+
Sbjct: 239 ADVISMSPCAIQLRYLQTLNSIS 261
>U40409-9|AAA81390.3| 314|Caenorhabditis elegans Stomatin protein 2
protein.
Length = 314
Score = 31.9 bits (69), Expect = 0.47
Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = -3
Query: 634 ITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLILDDISITHLTFGKEFTQ 455
+ L+ ++ E+++ RE ++ + L E +G+ ++ + I K+
Sbjct: 185 LAQTTLRNMLGTRSLSEILSDRETLAASMQTILDEATESWGIKVERVEI------KDVRL 238
Query: 454 AVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLL--AKSFGSAGEGLVELR 281
++L++ EAE R + +A VIAAEG+ +A+ L A S + ++LR
Sbjct: 239 PIQLQRAMAAEAEATR--------EARAKVIAAEGEQKASRALRDAASVIAQSPAALQLR 290
Query: 280 RIEAAEDIA 254
++ +A
Sbjct: 291 YLQTLNSVA 299
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = -3
Query: 457 QAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLAKSFGSAGEGLVELRR 278
+A + KQ+ EAEKAR EKA +++K A + +A AA + E RR
Sbjct: 1155 RAAKTKQM--DEAEKARLEAEKAAEKEKKAKERKKMEASAAAAPESTNSITAR---EERR 1209
Query: 277 IEAAEDI 257
I+ AE++
Sbjct: 1210 IQQAEEM 1216
>Z66500-5|CAA91306.1| 168|Caenorhabditis elegans Hypothetical
protein T05C12.5 protein.
Length = 168
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -3
Query: 460 TQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLAKSFGS 308
T +V +Q+ + A+ R L+EK ++ K V + + + +++ KSF S
Sbjct: 27 TSSVAKRQIESKNAQLLRQLIEKKNKKLKKKVYSNAEEQEIDLIIQKSFDS 77
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 694 QLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELIT-QREIVSQKVNDSLTERAAQ 518
Q+ + T+ G+ +E +T E +A+ FDA L T +RE+ + +N E
Sbjct: 680 QVAKNETLTGLS-EENARKILTVEEKQAL---FDAASLATPKREMSGKTINPVHIESHHT 735
Query: 517 FGLILDDISITHLTFGKE 464
G I SITHL+FG++
Sbjct: 736 IGDIFR--SITHLSFGRQ 751
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -3
Query: 457 QAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAEGDAQAAVLLAKSFGSAGEG-----L 293
+A + KQ+ EAEKAR EKA +++K A E + + + S +A E
Sbjct: 1163 RAAKTKQM--DEAEKARLEAEKAAEKEKKAKEREEAKERKKMEVEASAAAAPESSNSITA 1220
Query: 292 VELRRIEAAEDI 257
E RRI+ AE++
Sbjct: 1221 REERRIQQAEEM 1232
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 694 QLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELIT-QREIVSQKVNDSLTERAAQ 518
Q+ + T+ G+ +E +T E +A+ FDA L T +RE+ + +N E
Sbjct: 680 QVAKNETLTGLS-EENARKILTVEEKQAL---FDAASLATPKREMSGKTINPVHIESHHT 735
Query: 517 FGLILDDISITHLTFGKE 464
G I SITHL+FG++
Sbjct: 736 IGDIFR--SITHLSFGRQ 751
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 421 AEKARFLV-EKAEQQKKAAVIAAEGDAQAAVLLAKSFGSAGEGLVELRR 278
A +A FL E+A Q+++A A DAQA +A GL+EL R
Sbjct: 437 AGEAEFLKWEEARQKREAVAAAPYEDAQAHQFVASPPPHVSSGLIELIR 485
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 421 AEKARFLV-EKAEQQKKAAVIAAEGDAQAAVLLAKSFGSAGEGLVELRR 278
A +A FL E+A Q+++A A DAQA +A GL+EL R
Sbjct: 449 AGEAEFLKWEEARQKREAVAAAPYEDAQAHQFVASPPPHVSSGLIELIR 497
>Z69902-6|CAD89723.1| 684|Caenorhabditis elegans Hypothetical
protein C47D12.6b protein.
Length = 684
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -3
Query: 664 IDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLILDDISIT 485
I+Y+E ++ +V KA +AQF+ +I +E + VN + A + + LD +
Sbjct: 606 IEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLISK 665
Query: 484 HLTFGKEFTQAVE 446
F E+ E
Sbjct: 666 FRRFADEYVADTE 678
>Z69902-5|CAA93762.1| 725|Caenorhabditis elegans Hypothetical
protein C47D12.6a protein.
Length = 725
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = -3
Query: 664 IDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLILDDISIT 485
I+Y+E ++ +V KA +AQF+ +I +E + VN + A + + LD +
Sbjct: 647 IEYEENCGDTMNKQVRKAQLAQFNFILVIGAKEKENGTVNVRTRDNAVRGEVALDKLISK 706
Query: 484 HLTFGKEFTQAVE 446
F E+ E
Sbjct: 707 FRRFADEYVADTE 719
>U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine
receptor, class x protein20 protein.
Length = 286
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 126 YCTFFINIQLVNLTLI*FCVGRFSS 200
YC F NI LVN TLI + F S
Sbjct: 169 YCDFIFNIVLVNFTLILNLIAAFKS 193
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 616 KAVVAQFDAGELITQREIVS-QKVNDSLTERAAQFGLILDDIS 491
K +V +F A E + ++++ S +K++ LTE GL+L D +
Sbjct: 465 KHLVERFSANEELIEQKLTSIEKLHQLLTELGGDSGLLLSDFN 507
>Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical
protein W04A4.5 protein.
Length = 1071
Score = 27.9 bits (59), Expect = 7.7
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = -3
Query: 697 DQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQREIVSQKV--NDSLTER- 527
D PRI IL +D +E + I + LK D+G L ++ +K+ D + E+
Sbjct: 174 DFKPRIEDILPMDEEEDEISMIDALYLKP---NLDSGVLTIYTMVLREKIIQADEVPEKI 230
Query: 526 --AAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVEKAEQQKKAAVIAAE 353
A+ L IS T T A++ VA + + E++ Q ++ +
Sbjct: 231 KLCARRSLAYSSISST-----ANRTAAIDF-HVALAISSSSSTSEEESAAQCESLLTRLA 284
Query: 352 GDAQAAVLLAKSFGSAGEGLVELRRIEAAEDIAYQLAKS 236
GD V SA EGL+ L + YQLAK+
Sbjct: 285 GDRDFRVRK-----SAAEGLLALSNVFKLSKATYQLAKT 318
>Z81532-8|CAB04327.2| 248|Caenorhabditis elegans Hypothetical
protein F36F2.4 protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -3
Query: 394 KAEQQKKAAVIAAEGDAQAA 335
KA Q +KA ++AAE DAQAA
Sbjct: 105 KAAQTEKAGMVAAEMDAQAA 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,537,671
Number of Sequences: 27780
Number of extensions: 240989
Number of successful extensions: 694
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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