Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P12
(365 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 73 2e-13
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 73 2e-13
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 73 2e-13
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 73 2e-13
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 73 2e-13
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 73 2e-13
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 73 2e-13
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 72 5e-13
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 72 5e-13
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 72 5e-13
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 72 5e-13
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 72 5e-13
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 72 5e-13
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 72 5e-13
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 72 5e-13
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 72 5e-13
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 42 6e-04
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 31 1.5
AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein pr... 29 3.5
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 29 3.5
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 29 3.5
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/74 (52%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 72.1 bits (169), Expect = 5e-13
Identities = 38/74 (51%), Positives = 44/74 (59%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLRLEC +
Sbjct: 61 KTTKKIVLRLECVE 74
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQ--VALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ L + R + +A+KRCKHFELGGDKKRKGQ+IQ
Sbjct: 54 PIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQ 105
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein
protein.
Length = 25
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -1
Query: 71 VALKRCKHFELGGDKKRKGQMIQ 3
+ +KR KHF+LGGDKKRKGQ+IQ
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQ 24
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -2
Query: 349 LTFVDIVPNELKNGERT--KTAQDVLQKM*MPQSTQGITVQKVQGKARCPG 203
L FV+ NEL+ G T K+ ++LQ Q T +TVQKV C G
Sbjct: 252 LCFVEREANELRRGRSTVTKSIVELLQTTGGIQGTLPLTVQKVLASQACHG 302
>AL831918-1|CAD38579.1| 810|Homo sapiens hypothetical protein
protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 150 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 257
W+W D+ + D N+F F W C+ IP L
Sbjct: 538 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 572
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 150 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 257
W+W D+ + D N+F F W C+ IP L
Sbjct: 2109 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2143
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 150 WVWTDHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVL 257
W+W D+ + D N+F F W C+ IP L
Sbjct: 2126 WIWHDNMQ-FLQDKNIFEHTYFGFMWQLCSCIPSTL 2160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,855,021
Number of Sequences: 237096
Number of extensions: 864057
Number of successful extensions: 1829
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1829
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -