BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P12
(365 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p pro... 83 1e-16
AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA... 83 1e-16
BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p pro... 66 2e-11
BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p pro... 27 7.5
AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p pro... 27 7.5
AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA... 27 7.5
>BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p
protein.
Length = 104
Score = 82.6 bits (195), Expect = 1e-16
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPKQRRT+ V+QYKKSKER AQGRRRYDRKQQG+GGQ+
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLR+EC +
Sbjct: 61 KTTKKIVLRMECTE 74
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQVALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ + K R Q LKRCKHFELGGDKKRKGQMIQ
Sbjct: 54 PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQ 103
>AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA
protein.
Length = 104
Score = 82.6 bits (195), Expect = 1e-16
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = -3
Query: 312 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXX 133
MVNVPKQRRT+ V+QYKKSKER AQGRRRYDRKQQG+GGQ+
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKA 60
Query: 132 XXXXKIVLRLECAD 91
KIVLR+EC +
Sbjct: 61 KTTKKIVLRMECTE 74
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQVALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ + K R Q LKRCKHFELGGDKKRKGQMIQ
Sbjct: 54 PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQ 103
>BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p
protein.
Length = 121
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = -3
Query: 243 SQYKKSKERHAAQGRRRYDRKQQGYGGQSXXXXXXXXXXXXKIVLRLECAD 91
+QYKKSKER AQGRRRYDRKQQG+GGQ+ KIVLR+EC +
Sbjct: 41 TQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTE 91
Score = 59.7 bits (138), Expect = 1e-09
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 152 PXSKRRQKPLRKLCSGLSVLIXKVRXQVALKRCKHFELGGDKKRKGQMIQ 3
P +++ K +K+ + K R Q LKRCKHFELGGDKKRKGQMIQ
Sbjct: 71 PIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQMIQ 120
>BT011125-1|AAR82792.1| 1030|Drosophila melanogaster LD07466p
protein.
Length = 1030
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 209 AACLSLDFLYCDTLCTLWHLH 271
A C S D L D C WH H
Sbjct: 272 AKCYSQDLLVYDVYCDSWHYH 292
>AY051898-1|AAK93322.1| 1232|Drosophila melanogaster LD38671p
protein.
Length = 1232
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 209 AACLSLDFLYCDTLCTLWHLH 271
A C S D L D C WH H
Sbjct: 474 AKCYSQDLLVYDVYCDSWHYH 494
>AE014297-4146|AAF56723.1| 1284|Drosophila melanogaster CG5634-PA
protein.
Length = 1284
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 209 AACLSLDFLYCDTLCTLWHLH 271
A C S D L D C WH H
Sbjct: 526 AKCYSQDLLVYDVYCDSWHYH 546
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,363
Number of Sequences: 53049
Number of extensions: 247556
Number of successful extensions: 753
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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