Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P12
         (365 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   0.85 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   0.85 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   3.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   6.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 182 NSRVTVVSPNPXSKRRQKPLR 120
           N R TVVSP P  +R  K ++
Sbjct: 896 NQRGTVVSPPPTKRRTMKVVK 916


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 0.85
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 182 NSRVTVVSPNPXSKRRQKPLR 120
           N R TVVSP P  +R  K ++
Sbjct: 934 NQRGTVVSPPPTKRRTMKVVK 954


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = -1

Query: 158 PNPXSKRRQKPLRKLCSGLSVLIXKVRXQVALKRCKHFELGGDK 27
           P P  + R   +  LC  L + + +       K  +  E  GDK
Sbjct: 120 PEPFGRVRDHNISALCKELGISVVQKVSHTLYKLDEIIERNGDK 163


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 171 NPAVYDHNVFYPGQRAFPWTFCTVIP 248
           NP + +        +  P TFC V P
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFP 216


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +3

Query: 171 NPAVYDHNVFYPGQRAFPWTFCTVIP 248
           NP + +        +  P TFC V P
Sbjct: 191 NPMIAELETLSVEPKVSPMTFCRVFP 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,956
Number of Sequences: 438
Number of extensions: 1788
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)