Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P11
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024810-4|AAF60758.2| 194|Caenorhabditis elegans Hypothetical ... 82 3e-16
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical pr... 23 6.5
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 27 9.3
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 9.3
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 9.3
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 9.3
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 9.3
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 9.3
AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical ... 27 9.3
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 9.3
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 9.3
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 9.3
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 9.3
>AC024810-4|AAF60758.2| 194|Caenorhabditis elegans Hypothetical
protein Y54E10A.7 protein.
Length = 194
Score = 81.8 bits (193), Expect = 3e-16
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Frame = -1
Query: 468 RIDKLRKTVTGLIKFERIELNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 289
R++ LR+ VT ++ ER EL NR EAR Y ERLI + G + T +M +WL EK
Sbjct: 36 RLEVLRRIVTRTVREERAELKWNRAVEARPYLERLIQLGVERGPLDEYTAEMMEWWLPEK 95
Query: 288 QLVHKLFKVLVPRFENSTVSYTKMIKAPK------AQNTEHTNKI----VLELRGNPYPD 139
L+ K+ +V+VPRF++ +T + + P QN K VLE+ GNP+P
Sbjct: 96 DLITKMHEVIVPRFQDRDSPFTSLFRLPPQRLQQFIQNKREVWKRYDIGVLEIDGNPFPQ 155
Query: 138 LIVKQPNNRLWIQNVLLDAAKYDYRQS 58
+ + + I +VLL A +++++
Sbjct: 156 IQADRVDQSESILDVLLADALRNHQKN 182
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +2
Query: 368 LSAYWRASSPRLIFNSILSNFINPVTVLRNLSILP-----SGPLRFFN 496
L+AYW A + R I N+ LS+ NP+ + S+ P + P FFN
Sbjct: 137 LAAYWFADNERAIANT-LSSMSNPIGIAVMYSLAPVFVNKTTPDNFFN 183
>Z92831-5|CAJ58498.1| 247|Caenorhabditis elegans Hypothetical
protein F22G12.8 protein.
Length = 247
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 474 EGRIDKLRKTVTGLIKFERIELNINRGDEARQYAERLIS 358
+ +D L +T G++K IEL IN+ + + E +S
Sbjct: 67 KSELDNLVETTEGIMKSNGIELIINKEIDQTKIREIALS 105
Score = 22.6 bits (46), Expect(2) = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 321 MDMANFWLLEKQLVHKLFKVLVPRF 247
MD A WL E + +K KVL+ F
Sbjct: 146 MDYAKDWLDEHMICYKEEKVLLATF 170
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +3
Query: 72 HILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLYVQYSEL*VL*SFLYKKL 236
H L+ ++H+ I YY+ +D A++I F+L + Y L ++ F+Y+K+
Sbjct: 478 HALEPYSVHYNFIKYYM--------LDAYAIIIIFFLSILY-VLNLIIKFVYRKI 523
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2443 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2497
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2422 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2476
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2478 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2532
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2432 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2486
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2432 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2486
>AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical
protein R02D3.1 protein.
Length = 934
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 353 ASDISLSAYWRASSPRLIFNSILSNFINPV 442
AS I YW A SPRLI N + PV
Sbjct: 309 ASVIINGVYWDAQSPRLITIPDAKNLLTPV 338
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2443 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2497
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2432 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2486
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2422 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2476
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +3
Query: 15 IGSLYQYLRQFRKFLIAYNHILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLY 185
+G+LY + F FL+A H L+H I+ ++ L + + V + Y++
Sbjct: 2478 LGNLYSWFAVFSSFLLA--HYLRHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIF 2532
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,797,440
Number of Sequences: 27780
Number of extensions: 263680
Number of successful extensions: 681
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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