Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P10
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   3.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   9.5  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               20   9.5  

>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 275 SSNIAAPPSLNLLGEISL 222
           S  ++ PP+LNL+ +I L
Sbjct: 28  SPTLSTPPTLNLMEQILL 45


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 38  NQCKNHNKSSRVCTNIK 88
           N C  +N SSR+  N++
Sbjct: 373 NSCNIYNASSRMENNLR 389


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 38  NQCKNHNKSSRVCTN 82
           ++C N NKS+  C N
Sbjct: 116 SECINANKSTDKCEN 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,292
Number of Sequences: 438
Number of extensions: 801
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)