Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P09
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    25   0.48 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   4.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.9  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   5.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 238 YKWIMLFIISVKLVFLDRNNLVN 170
           Y W+++ I ++ L F  R  L+N
Sbjct: 177 YLWVLILICNIALAFKQRYQLIN 199


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 464  IIWLHLVY 441
            I+WLHLVY
Sbjct: 990  IVWLHLVY 997


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 464 IIWLHLVY 441
           I+WLHLVY
Sbjct: 271 IVWLHLVY 278


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 61  FHTNEYLQTQRGFEI 17
           FHTN YL  +R  E+
Sbjct: 242 FHTNHYLTRRRRIEM 256


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 477 VIYLHYLVTFSLQGHYRSIYLYFHIINYNL 388
           ++YLH  V    Q  Y  +Y+   I  Y +
Sbjct: 241 LVYLHLAVMLGFQDIYMIVYIIVVIFWYTV 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 477 VIYLHYLVTFSLQGHYRSIYLYFHIINYNL 388
           ++YLH  V    Q  Y  +Y+   I  Y +
Sbjct: 241 LVYLHLAVMLGFQDIYMIVYIIVVIFWYTV 270


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
          protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 61 FHTNEYLQTQRGFEI 17
          FHTN YL  +R  E+
Sbjct: 24 FHTNHYLTRRRRIEM 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,823
Number of Sequences: 336
Number of extensions: 3115
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)