Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P09
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0493 - 4297761-4298288                                           35   0.078
03_05_0983 - 29402261-29402436,29402711-29402855,29402941-294030...    30   1.7  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    29   2.9  
07_03_0600 + 19866757-19867218,19867920-19868429                       29   5.1  
04_04_1542 - 34264994-34265331,34266195-34267029                       29   5.1  
02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619...    29   5.1  
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122...    28   6.7  

>08_01_0493 - 4297761-4298288
          Length = 175

 Score = 34.7 bits (76), Expect = 0.078
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -3

Query: 733 IHHHHPSPNQPAVIINQPPPP 671
           +HHHHPSP Q A+    PPPP
Sbjct: 98  MHHHHPSPPQHALSPAVPPPP 118


>03_05_0983 -
           29402261-29402436,29402711-29402855,29402941-29403063,
           29403280-29403579
          Length = 247

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 730 HHHHPSPNQPAVIINQPPPP 671
           HHHHP  +  + I+  PPPP
Sbjct: 24  HHHHPWGSSLSAIVAPPPPP 43


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = -3

Query: 730 HHHHPSPNQPAVIIN---QPPPP 671
           HHHHP P  P  +++    PPPP
Sbjct: 107 HHHHPPPPPPPHLLHYYGHPPPP 129


>07_03_0600 + 19866757-19867218,19867920-19868429
          Length = 323

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 724 HHPSPNQPAVIINQPPPP 671
           H P P QP  +  QPPPP
Sbjct: 60  HAPPPQQPPAMWGQPPPP 77


>04_04_1542 - 34264994-34265331,34266195-34267029
          Length = 390

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 730 HHHHPSPNQPAVIINQPPP 674
           HHHHP P QP     Q PP
Sbjct: 249 HHHHPPPPQPPPSSLQLPP 267


>02_02_0543 +
           11360514-11361350,11361434-11361559,11361648-11361976,
           11362078-11362861
          Length = 691

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 727 HHHPSPNQPAVIINQPPPP 671
           H  P P  PA+II++ PPP
Sbjct: 23  HRRPPPLPPAIIIHKDPPP 41


>01_05_0647 +
           23910318-23910694,23911732-23911867,23912067-23912277,
           23912357-23912724,23913793-23914081,23914173-23914372,
           23914452-23914646
          Length = 591

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 733 IHHHHPSPNQPAVIINQPPPPY 668
           ++HH+P P  PA  +  P  PY
Sbjct: 70  VNHHYPPPTTPAYSLPPPAQPY 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,622,775
Number of Sequences: 37544
Number of extensions: 250093
Number of successful extensions: 761
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)