Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P09
         (738 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ...    30   7.5  
BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase, TRF1-interac...    30   10.0 
AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting ankyri...    30   10.0 

>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
           protein.
          Length = 1362

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 730 HHHHPSPNQ-PAVIINQPPPP 671
           HHHH    Q PA +  QPPPP
Sbjct: 740 HHHHQQMQQAPAPVPQQPPPP 760


>BC098394-1|AAH98394.1| 1327|Homo sapiens tankyrase,
           TRF1-interacting ankyrin-related ADP-ribose polymerase
           protein.
          Length = 1327

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 730 HHHHPSPNQPAVIINQPPPP 671
           HHHH    QPA   + PPPP
Sbjct: 11  HHHHQQQLQPAPGASAPPPP 30


>AF082556-1|AAC79841.1| 1327|Homo sapiens TRF1-interacting
           ankyrin-related ADP-ribose polymerase protein.
          Length = 1327

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 730 HHHHPSPNQPAVIINQPPPP 671
           HHHH    QPA   + PPPP
Sbjct: 11  HHHHQQQLQPAPGASAPPPP 30


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,597,692
Number of Sequences: 237096
Number of extensions: 1530560
Number of successful extensions: 2846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2800
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)