Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P08
         (800 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    24   1.4  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    24   1.4  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    24   1.4  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    24   1.4  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   1.9  

>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 526 IYNLGNSVIQLKYYNIKYM 470
           I+N  N+  +L+YYNI Y+
Sbjct: 90  IHNNNNNYKKLQYYNINYI 108


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 526 IYNLGNSVIQLKYYNIKYM 470
           I+N  N+  +L+YYNI Y+
Sbjct: 90  IHNNNNNYKKLQYYNINYI 108


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 526 IYNLGNSVIQLKYYNIKYM 470
           I+N  N+  +L+YYNI Y+
Sbjct: 90  IHNNNNNYKKLQYYNINYI 108


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 526 IYNLGNSVIQLKYYNIKYM 470
           I+N  N+  +L+YYNI Y+
Sbjct: 90  IHNNNNNYKKLQYYNINYI 108


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 526 IYNLGNSVIQLKYYNIKYM 470
           I+N  N+  +L+YYNI Y+
Sbjct: 323 IHNNNNNYKKLQYYNINYI 341


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 266 PAQQFQLGLHFLIYSIHRIK 207
           P+Q+F  G ++  YS+H ++
Sbjct: 425 PSQRFASGRYYSAYSLHHVR 444


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,123
Number of Sequences: 438
Number of extensions: 3560
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)