Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P04
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   4.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 639 VCLLVVRVFIIYILATRPR--FASETVIYY*FLHYLMDVIIHIN 514
           +CL+  RVFI++I+       +  E   YY  L Y   +++++N
Sbjct: 301 LCLIPFRVFILWIILVPEEQVYHLEIEKYYNIL-YFCRIMVYLN 343


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 334 PVLWVPDYIVHRYLLTF 384
           P++W+ D +V  YLL +
Sbjct: 292 PIVWLMDEVVEIYLLVY 308


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 334 PVLWVPDYIVHRYLLTF 384
           P++W+ D +V  YLL +
Sbjct: 292 PIVWLMDEVVEIYLLVY 308


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +2

Query: 134 YIIHPFTSYITLLISFFFVFRIXKHIRLKGDKKNMIC*SYAKLKYII 274
           Y++  F +Y+T   S F V  I K I  K  ++++      K K ++
Sbjct: 41  YLVSDFENYVTFFCSLFIVV-ILKLILAKYRQQDVTLLQITKAKNLL 86


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +1

Query: 661 VRCGNRTHDPRRNSQRMLTT 720
           VRC  R H P R  +   TT
Sbjct: 105 VRCALRKHKPNRKPRTPFTT 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,760
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)