Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P02
         (658 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical ...    28   6.7  

>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = -1

Query: 451 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 293
           AK++ +  +  +   ++  + N + +T+EK    + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271


>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = -1

Query: 451 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 293
           AK++ +  +  +   ++  + N + +T+EK    + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271


>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
           protein C34E11.3 protein.
          Length = 1577

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = -1

Query: 451 AKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQ 293
           AK++ +  +  +   ++  + N + +T+EK    + E+F L EK R+++ + +
Sbjct: 219 AKVKELEYEIRVAKEVSVRLHNELEQTEEKRCKLEDEVFYLKEKVREIQTQNK 271


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
           protein F54B3.1b protein.
          Length = 3394

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 FTLSR--RCDCSSSFNCLVFSQRINNSFCAATSFSWVLLIAFSILSVKDACKEGFVGIIS 443
           FT  R  + DC    N +++S ++  +FC   + ++V L    + + +++ K  +  I  
Sbjct: 608 FTTERILKFDCRYPLNAVLYSIKVRATFCLVENQTYVTL----VYATQNSKKPSYFFIRK 663

Query: 444 IFASKDIHFSNTSFFSGST 500
           +  +  +    T+F  G T
Sbjct: 664 VICNGPVAIIKTAFLGGVT 682


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
           protein F54B3.1a protein.
          Length = 3396

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 FTLSR--RCDCSSSFNCLVFSQRINNSFCAATSFSWVLLIAFSILSVKDACKEGFVGIIS 443
           FT  R  + DC    N +++S ++  +FC   + ++V L    + + +++ K  +  I  
Sbjct: 608 FTTERILKFDCRYPLNAVLYSIKVRATFCLVENQTYVTL----VYATQNSKKPSYFFIRK 663

Query: 444 IFASKDIHFSNTSFFSGST 500
           +  +  +    T+F  G T
Sbjct: 664 VICNGPVAIIKTAFLGGVT 682


>AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical
           protein Y116F11B.11 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = -1

Query: 448 KIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKEL--FILWEKTRQLKLEEQSHRLDR 275
           K   +P KP LQ  +++ IEN +N  Q+      KE+  FI ++     KLE+ S +  +
Sbjct: 241 KCNSLPVKPILQTEISNLIEN-VNSVQKLHQMPTKEMAVFICFQ-----KLEKDSEKFLK 294

Query: 274 VKRV 263
           V +V
Sbjct: 295 VIQV 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,563,833
Number of Sequences: 27780
Number of extensions: 192243
Number of successful extensions: 780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)