Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_O21
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535... 140 7e-34
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605... 139 2e-33
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594... 120 1e-27
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 107 8e-24
01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464... 58 5e-09
07_03_1039 - 23454130-23454552,23454859-23455536 35 0.051
07_03_0075 - 13096386-13096554,13096642-13096766,13096851-130971... 30 1.5
09_04_0692 + 19502878-19502920,19505011-19505104,19505196-195052... 29 2.5
08_02_0370 - 16333471-16333526,16333821-16333912,16334553-163346... 29 4.4
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 7.7
>01_06_0411 +
29151647-29151790,29152974-29153039,29153398-29153538,
29153638-29153724,29153968-29154084,29154177-29154265,
29154510-29154561,29154667-29154762,29154835-29154879,
29155002-29155091,29155164-29155235,29155490-29155618
Length = 375
Score = 140 bits (340), Expect = 7e-34
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 2/208 (0%)
Frame = -2
Query: 669 NFRTNPNYMXMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXX 493
+F+ Y+ + +LFNE ++T+ GQ LD +T + + D + + L
Sbjct: 169 HFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYS 228
Query: 492 YNLPVSLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQE 316
+ LPV+ LLL+ EN+D + ++I +E+GT FQ+QDD++DC+GD GK+GTDI++
Sbjct: 229 FYLPVACALLLSGENLDN--FGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIED 286
Query: 315 RKCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDN 136
KC+WL VQAL+R E Q+ + YG +P V ++K LY++L+L ++ E+ Y+
Sbjct: 287 YKCSWLVVQALERADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNK 346
Query: 135 IIRQIENIPIEAARVRFKKLLEXTXKRQ 52
+I IE P +A + K L KRQ
Sbjct: 347 LIADIEAHPNKAVQNVLKSFLHKIYKRQ 374
>05_06_0265 -
26759960-26760088,26760315-26760386,26760457-26760546,
26760649-26760693,26760785-26760880,26760980-26761031,
26761209-26761297,26761388-26761504,26761680-26761737,
26761834-26761936,26762027-26762051,26762677-26762826
Length = 341
Score = 139 bits (336), Expect = 2e-33
Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Frame = -2
Query: 669 NFRTNPNYMXMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTLDRXXXXXXXXXXXXX 493
+FR Y + +LFNE ++T+ GQ LD +T + + D + + +
Sbjct: 135 HFRGKLYYADLLDLFNEVEFKTASGQLLDLITTHEGEKDLNKYNIGVHRRIVQYKTSYYS 194
Query: 492 YNLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQER 313
+ LPV+ LLL+ D Y + +DI +++G FQ+QDD++DC+GD GK+GTDI++
Sbjct: 195 FYLPVACALLLSGE-DLTKYGAVEDILVKMGIYFQVQDDYLDCYGDPKFIGKIGTDIEDY 253
Query: 312 KCTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNI 133
KC+WL VQAL+R E+Q++V YG +PA V ++K LY +L+L ++ E Y +
Sbjct: 254 KCSWLVVQALERADESQKSVLFENYGKKDPACVAKVKSLYRELNLEAVFLDYENESYKKL 313
Query: 132 IRQIENIPIEAARVRFKKLLEXTXKRQ 52
I IE P A + K L KRQ
Sbjct: 314 IADIEAQPSIAVQNVLKSFLHKIYKRQ 340
>04_04_1432 -
33558895-33559023,33559215-33559286,33559405-33559494,
33559574-33559618,33559693-33559788,33559905-33559956,
33560044-33560132,33560226-33560342,33560448-33560534,
33560646-33560761,33560854-33560878,33561816-33562121
Length = 407
Score = 120 bits (288), Expect = 1e-27
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 1/206 (0%)
Frame = -2
Query: 666 FRTNPNYMXMFELFNETLWRTSMGQHLDHVTGNRKT-DYSSFTLDRXXXXXXXXXXXXXY 490
F+ ++ + EL+NE +T+MGQ LD +T + D + + + +
Sbjct: 202 FKEKFYFLDLMELWNEIGLQTAMGQMLDLITTHTGAKDLARYRIQGYRRIVKYKTSYYSF 261
Query: 489 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 310
LPV+ LLL Y +++ +E+G FQIQDD++DCFGD GKVGTDI++ K
Sbjct: 262 YLPVACALLL-NGARLSDYVELKNVLIEMGVYFQIQDDYLDCFGDPEVIGKVGTDIEDYK 320
Query: 309 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNII 130
C+WL VQA++ E + + YG S+P V +K +Y +L L I+ E +Y +++
Sbjct: 321 CSWLIVQAMELANENEMKILYENYGKSDPKCVAEVKSVYRELDLQDIFLEYESRVYKHLV 380
Query: 129 RQIENIPIEAARVRFKKLLEXTXKRQ 52
I+ A R K L+ +R+
Sbjct: 381 STIDAETDRAIRDILKSFLKKIYRRK 406
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 107 bits (257), Expect = 8e-24
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Frame = -2
Query: 666 FRTNPNYMXMFELFNETLWRTSMGQHLDHV-TGNRKTDYSSFTLDRXXXXXXXXXXXXXY 490
FR P ++ + E+++E +TS+GQ LD + T D + ++++ +
Sbjct: 214 FREKPYFLDILEIWSEIALQTSLGQMLDLISTHTGADDLAKYSIEGYRRIVKYKTAYYSF 273
Query: 489 NLPVSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERK 310
LPV+ LLL+ E + +DI +E+G FQIQDD++DCF D GK+GTDI++ K
Sbjct: 274 YLPVANALLLSGAKLED-FSGLKDILIEMGIYFQIQDDYLDCFADPNTIGKIGTDIEDHK 332
Query: 309 CTWLAVQALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHL 178
C+WL VQAL Q V YG + + V +KR Y L L
Sbjct: 333 CSWLIVQALGHADNNQIEVLHRNYGKKDSSSVSEVKRTYAALDL 376
>01_06_0363 -
28745581-28745709,28746043-28746114,28746373-28746417,
28746523-28746618,28747029-28747080,28747232-28747305,
28747386-28747502,28747844-28747930,28748186-28748281,
28748508-28748654
Length = 304
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = -2
Query: 666 FRTNPNYMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYN 487
FR Y+ + +LFNE +T+ GQ LD +T N L++ +
Sbjct: 134 FRGKSYYVDLLDLFNEVEIQTTSGQLLDQITTNEGRK----DLNKYRRIVEYKTAYYSFY 189
Query: 486 LPVSLGLLLA-ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK 337
LPV+ LLL E++D Y + I +E+G FQ QDD++DCFG+ GK
Sbjct: 190 LPVACALLLFDESLDN--YAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGK 238
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/74 (36%), Positives = 38/74 (51%)
Frame = -2
Query: 276 CTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAA 97
C + K YG S+PA V ++K LY +LHL +++ E+ Y+ +I IE P EA
Sbjct: 229 CFGEPEIIGKENYGKSDPACVAKVKDLYNELHLQRVFSEYERESYEKLISAIEAQPNEAV 288
Query: 96 RVRFKKLLEXTXKR 55
R K L KR
Sbjct: 289 RAVLKSFLHKIYKR 302
>07_03_1039 - 23454130-23454552,23454859-23455536
Length = 366
Score = 35.1 bits (77), Expect = 0.051
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -2
Query: 480 VSLGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCT 304
V +G +L DE+I +S + IG +FQ+ DD +D + GK G D+ K T
Sbjct: 260 VVIGAILGGGSDEQI-ESLRMYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT 318
Query: 303 WLAVQALQRCTE 268
+ + L++ E
Sbjct: 319 YPKLLGLEKSRE 330
>07_03_0075 -
13096386-13096554,13096642-13096766,13096851-13097117,
13097506-13097587,13097956-13098172,13098260-13098360,
13098425-13098627,13099261-13099334,13100246-13100429
Length = 473
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/52 (23%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 NSGHQGIVSHLFSSCFMLPLVRXLQQLFKAHAGGLYW-YIFNLSYNIVVHRF 153
+SG G++S + ++ LP+ + L++ ++ H +W +F L+ ++ + F
Sbjct: 73 HSGLSGVLSSVVAAIMQLPIFQPLREKYQTHFSSWFWDKVFPLAGDVSLKNF 124
>09_04_0692 +
19502878-19502920,19505011-19505104,19505196-19505227,
19505833-19506074,19506758-19506994,19508283-19508396
Length = 253
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 82 FKAHAGGLYWYIFNLSYNIVVH 147
F+ GG+YWY F YN+V+H
Sbjct: 231 FRDFTGGMYWYAF--IYNVVLH 250
>08_02_0370 -
16333471-16333526,16333821-16333912,16334553-16334671,
16335152-16335226,16335328-16335393,16335507-16335563,
16335640-16335689,16335774-16335944,16337057-16337183,
16337658-16338017
Length = 390
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = -2
Query: 474 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLA 295
L +++ E + + +++ + T++Q+ + ID G E+K ++ IQE C L
Sbjct: 215 LPIIVLEMPSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELF 274
Query: 294 VQALQRCTEA 265
+ + TE+
Sbjct: 275 LTKVGDHTES 284
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 304 STFALLYICTNFTSFYFIT 360
STF L+Y+ +F SF+FIT
Sbjct: 467 STFGLVYLIYSFCSFHFIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,959,328
Number of Sequences: 37544
Number of extensions: 327533
Number of successful extensions: 681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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