Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_O21
         (670 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...   151   1e-36
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...   151   1e-36
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...   151   1e-36
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...   151   1e-36
AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p pro...    29   7.6  
AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA...    29   7.6  
AY075463-1|AAL68276.1|  245|Drosophila melanogaster RE18374p pro...    28   10.0 
AE014297-4727|AAF57135.2|  436|Drosophila melanogaster CG31005-P...    28   10.0 

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score =  151 bits (365), Expect = 1e-36
 Identities = 77/198 (38%), Positives = 111/198 (56%)
 Frame = -2

Query: 648 YMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 469
           Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + LP +L 
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279

Query: 468 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 289
           L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV 
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339

Query: 288 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 109
           A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+   
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399

Query: 108 IEAARVRFKKLLEXTXKR 55
                  F ++L    +R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score =  151 bits (365), Expect = 1e-36
 Identities = 77/198 (38%), Positives = 111/198 (56%)
 Frame = -2

Query: 648 YMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 469
           Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + LP +L 
Sbjct: 183 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 240

Query: 468 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 289
           L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV 
Sbjct: 241 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 300

Query: 288 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 109
           A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+   
Sbjct: 301 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 360

Query: 108 IEAARVRFKKLLEXTXKR 55
                  F ++L    +R
Sbjct: 361 RGVPHQTFLQILNKIYQR 378


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score =  151 bits (365), Expect = 1e-36
 Identities = 77/198 (38%), Positives = 111/198 (56%)
 Frame = -2

Query: 648 YMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 469
           Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + LP +L 
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279

Query: 468 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 289
           L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV 
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339

Query: 288 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 109
           A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+   
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399

Query: 108 IEAARVRFKKLLEXTXKR 55
                  F ++L    +R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score =  151 bits (365), Expect = 1e-36
 Identities = 77/198 (38%), Positives = 111/198 (56%)
 Frame = -2

Query: 648 YMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSLG 469
           Y+ + ELF+E  + T+ GQ LD +  NR    S FT++              + LP +L 
Sbjct: 222 YVALMELFHEITYITTCGQSLDQLNSNRCV--SEFTMENYKAIVENKTAYYSFYLPFALA 279

Query: 468 LLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQ 289
           L LA   D + ++ ++ I LE+G  FQ+QDDF+DCFG+   TGK+GTDIQ+ KC+WLAV 
Sbjct: 280 LHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQDNKCSWLAVV 339

Query: 288 ALQRCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIP 109
           A+QR    Q+ +   CYG  EPA VER+K LY++L LP  Y   E+  Y+ I   I+   
Sbjct: 340 AMQRANVEQKQIMVDCYGKEEPAKVERVKELYKELGLPSTYAIFEEESYNMIKTHIQQTS 399

Query: 108 IEAARVRFKKLLEXTXKR 55
                  F ++L    +R
Sbjct: 400 RGVPHQTFLQILNKIYQR 417


>AY069353-1|AAL39498.1|  696|Drosophila melanogaster LD05963p
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 344 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 216
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


>AE014134-2323|AAF53277.1|  696|Drosophila melanogaster CG6116-PA
           protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 344 LVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVMVAVNQHM 216
           +++L +IY   NV G QF  C     H  QY+     A N  +
Sbjct: 423 VLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQL 465


>AY075463-1|AAL68276.1|  245|Drosophila melanogaster RE18374p
           protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = -2

Query: 447 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 271
           D+ + + A      IG  FQ+ DD +D      + GK    D++    T   + A ++  
Sbjct: 115 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 174

Query: 270 EAQRTVFKACYGSSEPAHVERIKRLYEDLH 181
           E    V +     SEP  VER   L    H
Sbjct: 175 ELNPMVMRR---FSEPGDVERAFELVHKSH 201


>AE014297-4727|AAF57135.2|  436|Drosophila melanogaster CG31005-PA
           protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = -2

Query: 447 DEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWLAVQALQRCT 271
           D+ + + A      IG  FQ+ DD +D      + GK    D++    T   + A ++  
Sbjct: 306 DDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFACEKYP 365

Query: 270 EAQRTVFKACYGSSEPAHVERIKRLYEDLH 181
           E    V +     SEP  VER   L    H
Sbjct: 366 ELNPMVMRR---FSEPGDVERAFELVHKSH 392


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,636,177
Number of Sequences: 53049
Number of extensions: 565422
Number of successful extensions: 1731
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)