Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_O21
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical pr... 112 2e-25
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 31 0.56
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.0
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.0
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 29 3.0
U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q (ubi... 29 3.0
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 29 3.0
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 29 3.9
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 28 5.2
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 27 9.1
>Z81106-1|CAB03221.2| 352|Caenorhabditis elegans Hypothetical
protein R06C1.2 protein.
Length = 352
Score = 112 bits (270), Expect = 2e-25
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 7/188 (3%)
Frame = -2
Query: 651 NYMXMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDRXXXXXXXXXXXXXYNLPVSL 472
N + E + ++ +T +GQ LD + N+ SSFT DR P+ +
Sbjct: 148 NLDRLCEAYRKSKQKTLIGQFLDTSSVNQ---ISSFTWDRYELMVENKTSHYTVFHPIQM 204
Query: 471 GLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAV 292
L++++ + + S + + +IG +FQ QDDF+D +GD TGK+GTDIQ+ KCTWLAV
Sbjct: 205 ALIISDVL--AYHGSVKKVAYQIGFLFQSQDDFLDVYGDPKITGKIGTDIQDGKCTWLAV 262
Query: 291 QALQRCTEAQR-------TVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNI 133
+ALQ+ + FK +GS +P VE+IKR+Y++L L Q ++ EK I
Sbjct: 263 RALQKMHKTPEKWGAKLIEEFKTSFGSVDPEKVEKIKRIYDELQLKQEFRRFEKHFSGEI 322
Query: 132 IRQIENIP 109
+ I IP
Sbjct: 323 KKSISEIP 330
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 216 VERIKRL-YEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVRFKKLLEXTXKRQHEAR 40
V+ +++L ED P++ + ++ A YD +NI E+ K K++ E
Sbjct: 204 VDNLEKLNIEDKAEPEVEEKKDAAFYDKKTSFFDNISCESLEKAEGKTGRPDWKKERETN 263
Query: 39 REEMRHNAL 13
+E HNA+
Sbjct: 264 QETFGHNAV 272
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 383 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 237
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 383 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 237
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 383 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 237
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 187 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 234
>U80443-7|AAB37678.2| 393|Caenorhabditis elegans Coenzyme q
(ubiquinone) biosynthesisprotein 1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 465 LLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQ 319
+LA+ D K+++ A + +G FQ+ DD +D + GK V D++
Sbjct: 256 ILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLK 305
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -3
Query: 383 RTIS*TASVMK*KLVKLVQIYKSANVLGWQFKRCSAVLKHNVQYSKPVM 237
+TIS T + +K L I +AN + ++ R S LK+NVQ S P+M
Sbjct: 481 QTISITKAGVKATLNARASILAAANPVNGRYDR-SRPLKYNVQMSAPIM 528
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -2
Query: 174 QIY-KHQEKAMYDNIIRQIENIPIEAARV 91
Q+Y +HQ K YD ++R I + P+ A RV
Sbjct: 56 QLYAQHQGKFFYDRLVRHISSGPVIAMRV 84
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 216 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 112
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 383 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 417
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -2
Query: 216 VERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENI 112
+ER +R+ +DLHL I K DNI++ IE++
Sbjct: 362 LERQQRMQKDLHLLYIAPLVAKTPKDNIVQIIEDV 396
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Frame = -2
Query: 222 AHVERIKRLYEDLHLPQIYKHQ------------EKAMYDNIIRQIENIPIEAARVRFKK 79
A RI +L +D+ + +Y Q E Y+N+ R++EN+ E +R+
Sbjct: 251 AQENRISQLMKDIQMKDLYLKQLGATGPPGGIPNENTNYENLQRELENVKAEKSRL---- 306
Query: 78 LLEXTXKRQHEARRE 34
L+E + H A RE
Sbjct: 307 LVESATLKAHYADRE 321
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +1
Query: 82 FKAHAGGLYW-YIFNLSYNIVVHRFFLMLVYLREVKVFVKSFYAFHMCWFTATITGFEYC 258
FK+ Y + ++ Y+I + F L ++ + ++F + F W T I G
Sbjct: 38 FKSELSLFYTRFAADIGYSISISNFKLYILAVMISEIFAVKNFIFITLWLT-IIFGIIRT 96
Query: 259 TLCFSTALQRLNCQPSTFALLYICTN 336
+L F T L R+ S F + C N
Sbjct: 97 SLLFLTTLDRV---ISLFFPFFYCAN 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,980,235
Number of Sequences: 27780
Number of extensions: 307856
Number of successful extensions: 887
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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