Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_O09
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0125 - 944207-945778                                             30   2.0  
04_04_1196 + 31663113-31663337,31663719-31663802,31665340-316654...    29   3.4  

>07_01_0125 - 944207-945778
          Length = 523

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -2

Query: 606 ISLAQRSGNFINYYPKIFL-CKLILPHGEEQKKNEIG 499
           + + +  GN +NYY +IF  C++ L H E+QK  +IG
Sbjct: 433 VVIPRTDGN-VNYYCEIFEHCRVELAHAEDQKAPKIG 468


>04_04_1196 +
           31663113-31663337,31663719-31663802,31665340-31665427,
           31666645-31666830,31667245-31667351
          Length = 229

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 570 YYPKIFLCKLILPHGEEQKKN-EIGSFLASLI 478
           +Y  +  C L+LP+G E  KN ++  FLA ++
Sbjct: 119 FYYLLIACSLVLPYGSELHKNMDLPEFLAKIL 150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,114
Number of Sequences: 37544
Number of extensions: 316059
Number of successful extensions: 446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)