Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_O07
         (308 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0979 + 33268294-33269595                                         28   1.3  
01_06_0642 + 30811708-30811768,30812256-30812305,30812455-308129...    28   1.3  
07_01_0991 - 8358309-8358338,8359115-8359393,8359964-8360092,836...    27   2.3  
04_03_0314 - 14238620-14240128                                         27   2.3  
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948     27   3.0  
06_01_0471 - 3341839-3341881,3341987-3342080,3344724-3344914,334...    27   4.0  
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915...    26   6.9  
01_01_0150 - 1344247-1345011                                           26   6.9  
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522...    25   9.2  

>02_05_0979 + 33268294-33269595
          Length = 433

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 110 RWGNLPFLPPSKEKCSDRHNRHRA*C*SISSGCVAALRIRILGHRKMAIYLWQRKTTMIV 289
           +W +L   PP +E  + RH  H       S  C   + ++I GH     YLW   T  I+
Sbjct: 94  QWQHLIPRPPVEEIMTARHLPHGTIFPLASKSCHGLVLLKITGHH--THYLWNPSTRHIL 151


>01_06_0642 +
           30811708-30811768,30812256-30812305,30812455-30812926,
           30813237-30813596,30813694-30814101,30814383-30814453,
           30814553-30814629,30814741-30814888,30815878-30816039,
           30816119-30816304
          Length = 664

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 58  LHYVLLLSSPIRALXLRAVGEPSFLATK*REMFRPPQPPSRL 183
           L ++LL ++ +R +   A G+ SF A     +  PP PP R+
Sbjct: 170 LVFLLLAAAGLRVVPFLASGDVSFAAPVPAAVVYPPPPPPRI 211


>07_01_0991 -
           8358309-8358338,8359115-8359393,8359964-8360092,
           8360317-8360598,8361400-8361525,8363490-8363870
          Length = 408

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 150 NVPTATTAIAPSAKALAADVL 212
           ++PT TTA +P+ KAL  D+L
Sbjct: 25  HLPTTTTAASPALKALGEDLL 45


>04_03_0314 - 14238620-14240128
          Length = 502

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 135 HQVKRNVPTATTAIAPSAKALAADV 209
           H +  N+ T   A+ P+A+ALAAD+
Sbjct: 145 HPLSPNLSTLAVALTPAAEALAADL 169


>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
          Length = 712

 Score = 27.1 bits (57), Expect = 3.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 101 SSVRWGNLPFLPPSKEKCSDRHNRHRA 181
           S +RW    FLPPS +  SD H + RA
Sbjct: 498 SRLRWACDRFLPPSTQLQSDTHWKTRA 524


>06_01_0471 -
           3341839-3341881,3341987-3342080,3344724-3344914,
           3345025-3345248
          Length = 183

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -1

Query: 194 CFSTRRDGGCGG 159
           C   RRDGGCGG
Sbjct: 87  CLHRRRDGGCGG 98


>08_02_0751 +
           20789843-20789908,20791152-20791313,20791516-20791566,
           20792096-20792160,20792385-20792459,20792603-20792780,
           20793171-20793353,20793436-20793549,20793627-20793736,
           20793826-20793904,20794035-20794172
          Length = 406

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +3

Query: 153 VPTATTAIAPSAKALAA 203
           VPTATTA AP+A   AA
Sbjct: 123 VPTATTASAPAAAVTAA 139


>01_01_0150 - 1344247-1345011
          Length = 254

 Score = 25.8 bits (54), Expect = 6.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 57  AALCSATIFADSRLXAPCGGGTFLSC 134
           +A C   + A +   +PCGGG  L C
Sbjct: 68  SAACKECVAAPAAGDSPCGGGAALVC 93


>01_03_0175 +
           13450869-13451013,13451293-13451372,13451417-13452240,
           13452287-13452638
          Length = 466

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 168 LWRSEHFSLLGGKKGRFPHR 109
           LW  EHF L  G +   PHR
Sbjct: 67  LWSIEHFGLRTGLRRPLPHR 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,159,036
Number of Sequences: 37544
Number of extensions: 171592
Number of successful extensions: 507
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)