Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_O07
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U54559-1|AAD03465.1| 352|Homo sapiens translation initiation fa... 29 3.7
CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein. 29 3.7
BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation ... 29 3.7
BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein. 29 3.7
BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation ... 29 3.7
AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation ... 29 3.7
AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation ... 29 3.7
AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation ... 27 8.5
AF042838-1|AAC97073.1| 1495|Homo sapiens MEK kinase 1 protein. 27 8.5
>U54559-1|AAD03465.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>CR456906-1|CAG33187.1| 352|Homo sapiens EIF3S3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>BT019594-1|AAV38401.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>BC090880-1|AAH90880.1| 349|Homo sapiens EIF3H protein protein.
Length = 349
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 289 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 341
>BC000386-1|AAH00386.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>AK222620-1|BAD96340.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>AF092576-1|AAC84044.1| 352|Homo sapiens translation initiation
factor eIF3 p40 subunit protein.
Length = 352
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 267
GEP ++F+PPQPP+R+ +L Q C N +++QN G LF+A
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344
>AK222520-1|BAD96240.1| 352|Homo sapiens eukaryotic translation
initiation factor 3, subunit 3 gamma, 40kDa variant
protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 115 GEPSFLATK*REMFRPPQPPSRL 183
GEP ++F+PPQPP+R+
Sbjct: 292 GEPPLPEEDLSKLFKPPQPPARM 314
>AF042838-1|AAC97073.1| 1495|Homo sapiens MEK kinase 1 protein.
Length = 1495
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 142 TWWQERKVPPPHGAXRRESAKIVAEHSAAE 53
T +Q VPPPHGA R A + +A +
Sbjct: 84 TGFQPVAVPPPHGAASRRGAHLTESVAAPD 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,407,495
Number of Sequences: 237096
Number of extensions: 838337
Number of successful extensions: 1624
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1624
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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