Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_N21
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical p...    29   5.0  
U80840-1|AAK68304.1|  498|Caenorhabditis elegans Hypothetical pr...    29   5.0  
AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical ...    29   5.0  
AL033513-2|CAA22079.2|  439|Caenorhabditis elegans Hypothetical ...    28   6.6  
AL021446-4|CAA16267.2|  439|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z78542-10|CAB01751.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 267 YCISFCLFCTQDWIFDFH 214
           + I FCLFCT+ + F FH
Sbjct: 47  FTIIFCLFCTETYTFLFH 64


>U80840-1|AAK68304.1|  498|Caenorhabditis elegans Hypothetical
           protein F08D12.6 protein.
          Length = 498

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 733 NCALKSVLLLSFPLICAFKCFKARKQIDLSIRLAIA 626
           N  L  VLL++   +C F C  + +++++ IRL IA
Sbjct: 388 NLQLDDVLLMNCSKLCLFPCKLSSQELNIFIRLYIA 423


>AL031620-6|CAA20929.2|  428|Caenorhabditis elegans Hypothetical
           protein C18B12.6 protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 267 YCISFCLFCTQDWIFDFH 214
           + I FCLFCT+ + F FH
Sbjct: 47  FTIIFCLFCTETYTFLFH 64


>AL033513-2|CAA22079.2|  439|Caenorhabditis elegans Hypothetical
           protein Y70D2A.1 protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 151 FSVFRHL*FFLYFLKSLRMYYLHCLINP 68
           F +FR +   L F K    +Y +CLINP
Sbjct: 304 FQIFRAVVNLLEFTKFAMNFYFYCLINP 331


>AL021446-4|CAA16267.2|  439|Caenorhabditis elegans Hypothetical
           protein Y70D2A.1 protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 151 FSVFRHL*FFLYFLKSLRMYYLHCLINP 68
           F +FR +   L F K    +Y +CLINP
Sbjct: 304 FQIFRAVVNLLEFTKFAMNFYFYCLINP 331


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,153,466
Number of Sequences: 27780
Number of extensions: 321322
Number of successful extensions: 604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)