Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_N15
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha...    35   0.051
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros...    35   0.051
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro...    35   0.051
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA...    35   0.051
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    30   1.1  
AY102693-1|AAM27522.1|  433|Drosophila melanogaster LD45181p pro...    29   3.3  
AE014297-1932|AAF55129.1|  433|Drosophila melanogaster CG6912-PA...    29   3.3  
BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p pro...    28   5.8  
AY051929-1|AAK93353.1|  509|Drosophila melanogaster LD41216p pro...    28   5.8  
AE014297-2605|AAF55614.2|  509|Drosophila melanogaster CG5451-PA...    28   5.8  
AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA...    28   5.8  

>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
           protein.
          Length = 1639

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 348 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 223
           C+PG+R S A  G     +PC C      C   +GRC C H T G  C  C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774


>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
           Drosophila mRNA forlaminin B2 chain. ).
          Length = 1639

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 348 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 223
           C+PG+R S A  G     +PC C      C   +GRC C H T G  C  C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774


>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p
           protein.
          Length = 1639

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 348 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 223
           C+PG+R S A  G     +PC C      C   +GRC C H T G  C  C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774


>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
           protein.
          Length = 1639

 Score = 34.7 bits (76), Expect = 0.051
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = -3

Query: 348 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 223
           C+PG+R S A  G     +PC C      C   +GRC C H T G  C  C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
 Frame = -3

Query: 348  CSPGFRVSQASAGELHVPCSC-----------CIYRSGRC--CVHRTPGVLCVLC 223
            C+ GF     S GE+  PC C           C  R+G C  C++ T G  C LC
Sbjct: 1899 CANGFYGEPESIGEVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLC 1953


>AY102693-1|AAM27522.1|  433|Drosophila melanogaster LD45181p
           protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
 Frame = -3

Query: 342 PGFRVS--QASAGEL----HVPCSCCIYRSGRCCVHRTPGVLC 232
           P  R S  Q++A E+    H P  CC  +S R C++  P  +C
Sbjct: 274 PSLRPSTEQSAANEVFPGRHPPPQCCFVKSPRICINYAPNWVC 316


>AE014297-1932|AAF55129.1|  433|Drosophila melanogaster CG6912-PA
           protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
 Frame = -3

Query: 342 PGFRVS--QASAGEL----HVPCSCCIYRSGRCCVHRTPGVLC 232
           P  R S  Q++A E+    H P  CC  +S R C++  P  +C
Sbjct: 274 PSLRPSTEQSAANEVFPGRHPPPQCCFVKSPRICINYAPNWVC 316


>BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -1

Query: 407 SVTLRRTKQTIKMFKYLIFVALLAFASAKP 318
           S T  + ++++ MFK ++  ALLA A A+P
Sbjct: 4   STTQTKKQKSLNMFKLVVLSALLAVAVARP 33


>AY051929-1|AAK93353.1|  509|Drosophila melanogaster LD41216p
           protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +2

Query: 158 LIKCNKNMVMRM-SMRSMQPENMQSTQSTPGVRCTQQRPERYM---QQLQGTCSSPAEAW 325
           L+   + +V+ +  +R +        Q+ P     QQ PERY+     LQ     P EA+
Sbjct: 73  LLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQRAYFDPREAY 132

Query: 326 LTRKPGEQRRSSI 364
                 E+RR+ I
Sbjct: 133 AEGSSKEKRRTVI 145


>AE014297-2605|AAF55614.2|  509|Drosophila melanogaster CG5451-PA
           protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
 Frame = +2

Query: 158 LIKCNKNMVMRM-SMRSMQPENMQSTQSTPGVRCTQQRPERYM---QQLQGTCSSPAEAW 325
           L+   + +V+ +  +R +        Q+ P     QQ PERY+     LQ     P EA+
Sbjct: 73  LLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQRAYFDPREAY 132

Query: 326 LTRKPGEQRRSSI 364
                 E+RR+ I
Sbjct: 133 AEGSSKEKRRTVI 145


>AE013599-3816|AAF47165.3| 1669|Drosophila melanogaster CG4049-PA
            protein.
          Length = 1669

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 65   DFFFCLALESLNLNGKVFFFS 3
            + FFC+  ESLNL  ++  FS
Sbjct: 964  EIFFCILKESLNLGDRILLFS 984


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,846,097
Number of Sequences: 53049
Number of extensions: 218775
Number of successful extensions: 747
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)