Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_N12
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.15
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.15
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 2.4
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 2.4
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 2.4
L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeo... 28 5.6
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ... 28 5.6
Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical pr... 27 7.4
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 27 9.8
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 27 9.8
U64833-6|AAK95861.1| 350|Caenorhabditis elegans Hypothetical pr... 27 9.8
>Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical
protein T20G5.10 protein.
Length = 129
Score = 138 bits (335), Expect = 2e-33
Identities = 66/111 (59%), Positives = 81/111 (72%)
Frame = -1
Query: 385 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 206
KEH KQ +R VQE+ + E I AA L+ A+VDHLN VAQAY NQK+LD EAK
Sbjct: 3 KEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFENN 62
Query: 205 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLERAYE 53
+ +KQT+QWL + E + ALKEIGDVENW+++IENDMKIIT+TL RAYE
Sbjct: 63 SAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRAYE 113
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 253 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 74
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 73 TLE 65
++
Sbjct: 1078 NID 1080
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -1
Query: 253 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 74
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 73 TLE 65
++
Sbjct: 1078 NID 1080
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 415 CLIIKQYEFKKDNYICTYHTI 477
CLI K+YE + DN+ C Y I
Sbjct: 163 CLIDKEYELQSDNFSCGYRVI 183
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 184 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 297
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 520 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 558
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 184 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 297
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 450 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 488
>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
protein C18H2.5 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = -1
Query: 319 TAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENF--SS 146
TA + L +++LN Q +N+KK D + +LLH+ + S T +++T V SS
Sbjct: 455 TALDSLNNLNLENLN---PQETINEKKYDTDYQLLHKSSKIHS--TVEFITSVRRIGNSS 509
Query: 145 ALKEIGDVENWARSIENDMKIITDTLERAYEKAQE 41
K+I D + D + LE ++++
Sbjct: 510 DHKKIKDAVKIYSDMRTDYVAVEKFLEETRRQSKQ 544
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -1
Query: 247 QKKLDAEAKLLHQGAINFS-KQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDT 71
++ L+ E G +N+ K+ Q L VE + ALK +GDV A + EN +
Sbjct: 887 EEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDV---AYTCENAGYFFRFS 943
Query: 70 LERAYEKAQEKPSS 29
+ R +E+ K +S
Sbjct: 944 VCRVWEEFLAKVTS 957
>L14331-8|AAA28100.1| 586|Caenorhabditis elegans C.elegans homeobox
protein 26 protein.
Length = 586
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -1
Query: 259 AYLNQ-KKLDAEAKLLHQGAINFSKQTQQWL-TLVENFSSALKEIGDVENWA 110
A+L+Q +K A A++LH G IN + LV NF L+++ + +WA
Sbjct: 233 AFLDQQRKQVAAAQILHNGKINIERLVSSVKGDLVTNFMKDLEKV--IRDWA 282
>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
protein Y48G1C.5 protein.
Length = 1161
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 211 QGAINFSKQTQQWLTLVENFSSALKEIGDVENW--ARSIENDMKIITDT 71
Q I + Q+ T V++ +IGD++ W + + DMK ITD+
Sbjct: 114 QSNIGDDVEADQFFTTVKSVVHVAHDIGDLKKWPDETNFKADMKDITDS 162
>Z48795-6|CAA88730.1| 203|Caenorhabditis elegans Hypothetical
protein R05H5.7 protein.
Length = 203
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 212 PRCNKFFQTNTAMVDSCGKFQQCSQRNWGCRKLG 111
PR N F TN+ ++ + F +C + C++ G
Sbjct: 78 PRFNSFVNTNSIIISNENGFGECRPHHTNCQQSG 111
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 379 HQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVG-VAQAY 254
H K A+R + EQKR E +T N ++ H N V Q++
Sbjct: 10 HFVKSTARRFI-EQKRLESLTTGNGMSSPSSTHANTAPVVQSH 51
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 379 HQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVG-VAQAY 254
H K A+R + EQKR E +T N ++ H N V Q++
Sbjct: 10 HFVKSTARRFI-EQKRLESLTTGNGMSSPSSTHANTAPVVQSH 51
>U64833-6|AAK95861.1| 350|Caenorhabditis elegans Hypothetical
protein B0507.8 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = -1
Query: 379 HQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGV 266
H+A++ A +E++++ + A ND+ LVD ++G+
Sbjct: 125 HEAQREAASSEREERKENQVMAINDIRSDLVDVQSMGM 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,682,411
Number of Sequences: 27780
Number of extensions: 212158
Number of successful extensions: 667
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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