Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_N11
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497...    27   8.9  
03_05_0225 + 22111269-22111327,22111587-22111638,22112148-221121...    27   8.9  
03_03_0051 - 14091944-14091949,14092045-14092234,14092328-140924...    27   8.9  
03_03_0049 + 14082358-14082613,14084662-14084795,14084883-140849...    27   8.9  

>04_04_0924 -
           29449285-29449290,29449386-29449575,29449669-29449772,
           29449845-29449976,29450064-29450162,29450439-29450451,
           29450688-29450719,29450802-29450921,29450992-29451105,
           29451192-29451325,29454014-29454251
          Length = 393

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 261 FTKANQQGAFLYNQLQK 311
           F K NQQG F+YN L K
Sbjct: 206 FEKDNQQGFFIYNDLMK 222


>03_05_0225 +
           22111269-22111327,22111587-22111638,22112148-22112151,
           22112981-22113114,22113201-22113314,22113386-22113505,
           22113587-22113618,22113854-22113866,22114144-22114242,
           22114388-22114464,22114733-22114922,22115020-22115025
          Length = 299

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 261 FTKANQQGAFLYNQLQK 311
           F K NQQG F+YN L K
Sbjct: 165 FEKDNQQGFFIYNDLMK 181


>03_03_0051 -
           14091944-14091949,14092045-14092234,14092328-14092431,
           14092503-14092634,14092721-14092819,14093096-14093108,
           14093344-14093375,14093458-14093577,14093648-14093761,
           14093848-14093981,14095005-14095047,14095394-14095445,
           14095703-14095761
          Length = 365

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 261 FTKANQQGAFLYNQLQK 311
           F K NQQG F+YN L K
Sbjct: 178 FEKDNQQGFFIYNDLMK 194


>03_03_0049 +
           14082358-14082613,14084662-14084795,14084883-14084996,
           14085067-14085186,14085269-14085300,14085536-14085548,
           14085825-14085923,14086010-14086141,14086213-14086316,
           14086410-14086599,14086695-14086700
          Length = 399

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 261 FTKANQQGAFLYNQLQK 311
           F K NQQG F+YN L K
Sbjct: 212 FEKDNQQGFFIYNDLMK 228


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,927,655
Number of Sequences: 37544
Number of extensions: 140702
Number of successful extensions: 204
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)