Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_N07
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13584-1|CAA73911.1| 387|Homo sapiens serotonin receptor 4 prot... 30 6.0
Y12507-1|CAA73109.1| 360|Homo sapiens 5-HT4 receptor protein. 30 6.0
Y12506-1|CAA73108.1| 380|Homo sapiens 5-HT4 receptor protein. 30 6.0
Y12505-1|CAA73107.1| 388|Homo sapiens 5-HT4 receptor protein. 30 6.0
Y10437-1|CAA71462.1| 388|Homo sapiens serotonin receptor 4 prot... 30 6.0
Y09586-1|CAA70774.1| 387|Homo sapiens serotonin 4 receptor prot... 30 6.0
Y08756-1|CAA70002.1| 387|Homo sapiens serotonin 5-HT receptor p... 30 6.0
BC095497-1|AAH95497.1| 388|Homo sapiens 5-hydroxytryptamine (se... 30 6.0
BC074755-1|AAH74755.1| 388|Homo sapiens 5-hydroxytryptamine (se... 30 6.0
AJ633645-1|CAG17627.1| 378|Homo sapiens 5-hydroxytryptamine 4 r... 30 6.0
AJ519673-1|CAD58392.1| 388|Homo sapiens 5-hydroxytryptamine 4 r... 30 6.0
AJ278982-1|CAC22251.1| 359|Homo sapiens 5-hydroxytryptamine4 re... 30 6.0
AJ278981-1|CAC22250.1| 378|Homo sapiens 5-hydroxytryptamine4 re... 30 6.0
AJ278980-1|CAC22249.1| 388|Homo sapiens 5-hydroxytryptamine4 re... 30 6.0
AJ278979-1|CAC22248.1| 387|Homo sapiens 5-hydroxytryptamine4 re... 30 6.0
AJ243213-1|CAB71316.1| 393|Homo sapiens 5-HT4 receptor protein. 30 6.0
AJ131726-1|CAC79538.1| 428|Homo sapiens serotonin receptor 5-HT... 30 6.0
AJ131725-1|CAC79533.1| 378|Homo sapiens serotonin receptor 5-HT... 30 6.0
AJ131724-1|CAC20411.1| 388|Homo sapiens serotonin receptor 5-HT... 30 6.0
AJ011371-1|CAA09600.1| 378|Homo sapiens serotonin 4 receptor pr... 30 6.0
>Y13584-1|CAA73911.1| 387|Homo sapiens serotonin receptor 4
protein.
Length = 387
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y12507-1|CAA73109.1| 360|Homo sapiens 5-HT4 receptor protein.
Length = 360
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y12506-1|CAA73108.1| 380|Homo sapiens 5-HT4 receptor protein.
Length = 380
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y12505-1|CAA73107.1| 388|Homo sapiens 5-HT4 receptor protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y10437-1|CAA71462.1| 388|Homo sapiens serotonin receptor 4
protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y09586-1|CAA70774.1| 387|Homo sapiens serotonin 4 receptor
protein.
Length = 387
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>Y08756-1|CAA70002.1| 387|Homo sapiens serotonin 5-HT receptor
protein.
Length = 387
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>BC095497-1|AAH95497.1| 388|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 4 protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>BC074755-1|AAH74755.1| 388|Homo sapiens 5-hydroxytryptamine
(serotonin) receptor 4 protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ633645-1|CAG17627.1| 378|Homo sapiens 5-hydroxytryptamine 4
receptor isoform g2 protein.
Length = 378
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ519673-1|CAD58392.1| 388|Homo sapiens 5-hydroxytryptamine 4
receptor subunit b protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ278982-1|CAC22251.1| 359|Homo sapiens 5-hydroxytryptamine4
receptor protein.
Length = 359
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ278981-1|CAC22250.1| 378|Homo sapiens 5-hydroxytryptamine4
receptor protein.
Length = 378
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ278980-1|CAC22249.1| 388|Homo sapiens 5-hydroxytryptamine4
receptor protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ278979-1|CAC22248.1| 387|Homo sapiens 5-hydroxytryptamine4
receptor protein.
Length = 387
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ243213-1|CAB71316.1| 393|Homo sapiens 5-HT4 receptor protein.
Length = 393
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 258 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 289
>AJ131726-1|CAC79538.1| 428|Homo sapiens serotonin receptor 5-HT4
protein.
Length = 428
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ131725-1|CAC79533.1| 378|Homo sapiens serotonin receptor 5-HT4
protein.
Length = 378
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ131724-1|CAC20411.1| 388|Homo sapiens serotonin receptor 5-HT4
protein.
Length = 388
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
>AJ011371-1|CAA09600.1| 378|Homo sapiens serotonin 4 receptor
protein.
Length = 378
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 531 TKVKVNKKLCSIV*CFTADLRVFFIGNYLDPY 436
T+ K K LC I+ CF FF+ N +DP+
Sbjct: 253 TETKAAKTLCIIMGCFCLCWAPFFVTNIVDPF 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,685,744
Number of Sequences: 237096
Number of extensions: 1171314
Number of successful extensions: 1461
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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