Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_N07
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M83931-1|AAB04680.1| 1595|Drosophila melanogaster son of sevenle...    29   5.3  
M77501-1|AAA28904.1| 1596|Drosophila melanogaster son of sevenle...    29   5.3  
AE014134-2404|AAF53336.2| 1596|Drosophila melanogaster CG7793-PA...    29   5.3  

>M83931-1|AAB04680.1| 1595|Drosophila melanogaster son of sevenless
           protein protein.
          Length = 1595

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 105 NXKISSPNA-ATIHSYFI*KTYFLWNVKSSKKKCSEVACNSIEIIPRVE 248
           N K  +P+A AT + Y + + YF+  V  + +  S+   NS E+ PR++
Sbjct: 514 NTKKQTPSAGATAYDYRLKEKYFMRRVDINDRPDSDDLKNSFELAPRMQ 562


>M77501-1|AAA28904.1| 1596|Drosophila melanogaster son of sevenless
           protein.
          Length = 1596

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 105 NXKISSPNA-ATIHSYFI*KTYFLWNVKSSKKKCSEVACNSIEIIPRVE 248
           N K  +P+A AT + Y + + YF+  V  + +  S+   NS E+ PR++
Sbjct: 515 NTKKQTPSAGATAYDYRLKEKYFMRRVDINDRPDSDDLKNSFELAPRMQ 563


>AE014134-2404|AAF53336.2| 1596|Drosophila melanogaster CG7793-PA
           protein.
          Length = 1596

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 105 NXKISSPNA-ATIHSYFI*KTYFLWNVKSSKKKCSEVACNSIEIIPRVE 248
           N K  +P+A AT + Y + + YF+  V  + +  S+   NS E+ PR++
Sbjct: 515 NTKKQTPSAGATAYDYRLKEKYFMRRVDINDRPDSDDLKNSFELAPRMQ 563


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,826,343
Number of Sequences: 53049
Number of extensions: 371851
Number of successful extensions: 607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)