Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M21
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein. 130 3e-30
CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein. 130 3e-30
CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein. 130 3e-30
BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein. 130 3e-30
AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase (ubi... 130 3e-30
AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone oxidore... 130 3e-30
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.005
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.005
BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2 ... 33 0.55
BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2 ... 33 0.55
AK128602-1|BAC87523.1| 244|Homo sapiens lpha (Camkk1). protein. 31 2.2
AB075819-1|BAB85525.1| 1082|Homo sapiens KIAA1939 protein protein. 30 3.9
AF285118-1|AAG01155.1| 91|Homo sapiens CGI-203 protein. 29 6.8
AF170070-1|AAF25797.1| 91|Homo sapiens unknown protein. 29 6.8
>CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 69 E 67
+
Sbjct: 127 D 127
>CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 69 E 67
+
Sbjct: 127 D 127
>CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein.
Length = 154
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 69 E 67
+
Sbjct: 153 D 153
>BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein.
Length = 128
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 69 E 67
+
Sbjct: 127 D 127
>AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 6, 14kDa protein.
Length = 154
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 69 E 67
+
Sbjct: 153 D 153
>AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B14 protein.
Length = 128
Score = 130 bits (313), Expect = 3e-30
Identities = 54/121 (44%), Positives = 85/121 (70%)
Frame = -2
Query: 429 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 250
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 249 FIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNCLAKCFAGN 70
F+KN HVTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+ L+K + G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 69 E 67
+
Sbjct: 127 D 127
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = -2
Query: 363 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 184
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 183 ELKE 172
+KE
Sbjct: 60 VMKE 63
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.005
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = -2
Query: 363 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 184
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 183 ELKE 172
+KE
Sbjct: 60 VMKE 63
>BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -2
Query: 363 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 184
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 183 ELKE 172
+LKE
Sbjct: 75 QLKE 78
>BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -2
Query: 363 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIKGQM 184
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 183 ELKE 172
+LKE
Sbjct: 75 QLKE 78
>AK128602-1|BAC87523.1| 244|Homo sapiens lpha (Camkk1). protein.
Length = 244
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 22 RFNNFKLCPKSINQSFVSSKAFRKAIFWFRFFCWFEVSHNVPLLF 156
R++ F++C K + F + AF FWF FFC F + F
Sbjct: 161 RWSYFRMC-KFLCYFFYKNFAFTLVHFWFGFFCGFSAQVGKSMFF 204
>AB075819-1|BAB85525.1| 1082|Homo sapiens KIAA1939 protein protein.
Length = 1082
Score = 30.3 bits (65), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 22 RFNNFKLCPKSINQSFVSSKAFRKAIFWFRFFCWF 126
R++ F++C K + F + AF FWF FFC F
Sbjct: 753 RWSYFRMC-KFLCYFFYKNFAFTLVHFWFGFFCGF 786
>AF285118-1|AAG01155.1| 91|Homo sapiens CGI-203 protein.
Length = 91
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -2
Query: 372 AEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIK 193
A +R +VLSLY+A R+ K + ++++ F +NK+V D I LV K
Sbjct: 3 ASSRAQVLSLYRAMLRE----SKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNK 58
Query: 192 GQMEL 178
+ +L
Sbjct: 59 AKRDL 63
>AF170070-1|AAF25797.1| 91|Homo sapiens unknown protein.
Length = 91
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -2
Query: 372 AEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKHVTDIRVIDMLVIK 193
A +R +VLSLY+A R+ K + ++++ F +NK+V D I LV K
Sbjct: 3 ASSRAQVLSLYRAMLRE----SKRFSAYNYRTYAVRRIRDAFRENKNVKDPVEIQTLVNK 58
Query: 192 GQMEL 178
+ +L
Sbjct: 59 AKRDL 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,146,075
Number of Sequences: 237096
Number of extensions: 1302605
Number of successful extensions: 3974
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3974
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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