Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M19
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 0.97
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 23 2.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.9
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 9.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.97
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSIIH 291
IS ++ +Y Y + +NY P+Y +II+
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNIIN 340
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 585 TFTPGWGQGKRSEA-TDYRNDGCSSEDSVYTIYKLIK 478
T++ GW GKRS + + N D+V+ +L K
Sbjct: 25 TYSHGWTNGKRSTSLEELANRNAIQSDNVFANCELQK 61
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 82 ISSLSNNYNYNNYNNNYKPLYYNI 105
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 315 ISSLSNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 368 ISYVTLSYLYKHILHNYLPMYLSI 297
IS ++ +Y Y + +NY P+Y +I
Sbjct: 304 ISSLSNNYNYNNYNNNYKPLYYNI 327
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 610 LVGL*SSADVYSRLGPGQEIGGHRLQKR 527
L GL SSA S GPG L KR
Sbjct: 143 LHGLSSSAPTGSSCGPGAAAAAALLSKR 170
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 445 LNHIEPHRRC 416
LNH P+RRC
Sbjct: 1692 LNHCAPNRRC 1701
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,621
Number of Sequences: 438
Number of extensions: 3908
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -