Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M15
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 249 2e-66
AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 137 7e-33
U80837-1|AAB37900.1| 103|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical p... 29 5.0
AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical ... 29 5.0
Z81479-6|CAB03938.1| 411|Caenorhabditis elegans Hypothetical pr... 28 8.8
AC006680-10|AAK72297.2| 335|Caenorhabditis elegans Seven tm rec... 28 8.8
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 249 bits (609), Expect = 2e-66
Identities = 105/213 (49%), Positives = 150/213 (70%), Gaps = 1/213 (0%)
Frame = -2
Query: 790 FVEALLYXRDSGVLMLGDMVDEVG-RDGKLNPIGVWHAEWFFKQVEKHLKRKRTAIEYIP 614
FVEAL++ ++ G +MLG+ D D +NPIG W+ +WF+ VE + +K +IEYIP
Sbjct: 273 FVEALMFNKEKGCIMLGEFSDGPDTHDEVVNPIGRWYKKWFYTHVEDLINKKHESIEYIP 332
Query: 613 LRDYYHRHTRSLFWELQDIISFGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHV 434
LRDYYHRH++S+FWEL+DI+ FGNN +FRYL W+ PP+++ LK T P + KLY+++HV
Sbjct: 333 LRDYYHRHSKSIFWELRDIVPFGNNVLFRYLMAWMCPPKIAFLKATTPNVLRKLYDRSHV 392
Query: 433 IQDMLIPIELLEKAIAFFHDEFEVYPIWLCPFKIFNNPGQLKIKPGEESQMFVDIGVYGV 254
+QDML+P++ LE+ I FH E E+YP+WLCPF + + PG +K++ +M+VD+G YGV
Sbjct: 393 LQDMLVPLDKLEECIDLFHKEVEIYPMWLCPFYLKSQPGLMKLR-NATHKMYVDVGAYGV 451
Query: 253 PKAKGFETIASTRHVESFVIQNQGFQMLYADTY 155
G+ +TR +ESFV GFQM YAD Y
Sbjct: 452 TSKDGYHHERTTRRLESFVRSVNGFQMTYADIY 484
>AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical
protein Y7A5A.1 protein.
Length = 538
Score = 137 bits (332), Expect = 7e-33
Identities = 74/231 (32%), Positives = 127/231 (54%), Gaps = 16/231 (6%)
Frame = -2
Query: 790 FVEALLYXRDSGVLMLGDMVDEVGR-DGKLNPIGVWHAEWFFKQVEKHLKRKRTAIEYIP 614
++E +Y ++ V+M+G+ D + + K+N + ++ WF+K VE LK+ EYIP
Sbjct: 259 YLEVTIYDKNEAVIMVGNFADVDSKSNAKVNDVCWFYKPWFYKHVETFLKKGGE--EYIP 316
Query: 613 LRDYYHRHTRSLFWELQDIISFGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHV 434
L Y RH R++FW ++ +I FGN+ +FR GWL PP+ + LK T +AV ++ V
Sbjct: 317 LESYLLRHNRAIFWVVESMIPFGNHPVFRAFLGWLCPPKPAFLKFTTTQAVREMTFAKQV 376
Query: 433 IQDMLIPIELLEKAIAFFHDEFEVYPIWLCPFKIFNN-----PGQL------KIKPGEES 287
QD+++P++ L++ + F+ YP+ + P +I+++ GQL ++ PG
Sbjct: 377 FQDIVMPLDTLKEQVDTAVKLFDTYPLLVYPCRIYDHKGGAPQGQLRAPPKSRLVPGTNY 436
Query: 286 QMFVDIGVYGVP----KAKGFETIASTRHVESFVIQNQGFQMLYADTYTXE 146
MF D+GVYG P + + + + R +E F G+ LYAD + E
Sbjct: 437 SMFNDLGVYGTPGQVERREPYNPTHAMRAMEKFTRDVGGYSFLYADIFMSE 487
>U80837-1|AAB37900.1| 103|Caenorhabditis elegans Hypothetical
protein F07E5.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 754 VLMLG-DMVDEVGRDGKLNPIGVWHAEWFFKQVEKHLKRKRT 632
++M G D V E G GK P G + E K++ HLK+KR+
Sbjct: 39 IVMAGKDQVQEFG--GKKPPSGKYTIELMGKKIPNHLKKKRS 78
>Z92786-10|CAB07212.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 742 GDMVDEVGRDGKLNPIGVWHAEWFFKQVEKHLKRKRTAIEYI 617
GD+V +G GV H +WFFK K +++ I+Y+
Sbjct: 914 GDLVPTLGASSSDTKEGVIHKKWFFKM--KIDRQRAVCIDYL 953
>AL021473-3|CAA16306.3| 984|Caenorhabditis elegans Hypothetical
protein Y20C6A.1 protein.
Length = 984
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 742 GDMVDEVGRDGKLNPIGVWHAEWFFKQVEKHLKRKRTAIEYI 617
GD+V +G GV H +WFFK K +++ I+Y+
Sbjct: 914 GDLVPTLGASSSDTKEGVIHKKWFFKM--KIDRQRAVCIDYL 953
>Z81479-6|CAB03938.1| 411|Caenorhabditis elegans Hypothetical
protein C34F6.7 protein.
Length = 411
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -2
Query: 520 FGWLMPPEVSL--LKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEFEVYPIWL 347
F + PPE L L LT + T LYN D +E K +AFFH YP +
Sbjct: 46 FALVFPPEELLDGLGLTLFDLFTILYNSRQ--HDF---VEYAAKRVAFFHAFVAFYPCVI 100
Query: 346 CPFKIFNN 323
+ + N
Sbjct: 101 AAYFVHGN 108
>AC006680-10|AAK72297.2| 335|Caenorhabditis elegans Seven tm
receptor protein 41 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -2
Query: 550 FGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAI 389
FG F Y F + + +S+L LT P+ T Y +A +I+ + IE + + +
Sbjct: 133 FGVIFWILYPFLYGVVNSLSILFLTSPDGFTDDYLRAEIIEKYELDIENIARLV 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,186,896
Number of Sequences: 27780
Number of extensions: 390156
Number of successful extensions: 993
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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