BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M11
(386 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-P... 30 1.2
BT023852-1|AAZ86773.1| 146|Drosophila melanogaster IP13646p pro... 27 6.4
AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA... 27 6.4
BT022911-1|AAY55327.1| 376|Drosophila melanogaster IP11266p pro... 27 8.5
BT022408-1|AAY54824.1| 376|Drosophila melanogaster IP11566p pro... 27 8.5
BT022240-1|AAY54656.1| 376|Drosophila melanogaster IP11466p pro... 27 8.5
AE013599-677|AAF59065.1| 382|Drosophila melanogaster CG8734-PA ... 27 8.5
>AE014296-2651|AAN11763.1| 527|Drosophila melanogaster CG32152-PA
protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -2
Query: 196 ITFYPRCHPPLASPFREFWPMIRLTPPLPLTSLQGGIGFTFVNLRMKSERGNKLN 32
+ F C+P L SPF+ W L P ++ I +T NL+ K+ + NK N
Sbjct: 419 LNFKLSCNPCLKSPFKSLWMQSVLFVEQPFV-MRKNIHYT-GNLKFKTLKPNKFN 471
>BT023852-1|AAZ86773.1| 146|Drosophila melanogaster IP13646p
protein.
Length = 146
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 290 LFVGTNINRPMVYHHNAKYDAKLFRKRVENLHYV 189
+F+G +++R + YH +LF K NLH+V
Sbjct: 2 VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35
>AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA
protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 290 LFVGTNINRPMVYHHNAKYDAKLFRKRVENLHYV 189
+F+G +++R + YH +LF K NLH+V
Sbjct: 2 VFLGRHLSRSLAYHLKQPSWNRLFLKPRTNLHHV 35
>BT022911-1|AAY55327.1| 376|Drosophila melanogaster IP11266p
protein.
Length = 376
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 236 YDAKLFRKRVENLHYVLPQV 177
YD KL RKR E +VLPQ+
Sbjct: 214 YDRKLLRKRSEYRDHVLPQL 233
>BT022408-1|AAY54824.1| 376|Drosophila melanogaster IP11566p
protein.
Length = 376
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 236 YDAKLFRKRVENLHYVLPQV 177
YD KL RKR E +VLPQ+
Sbjct: 214 YDRKLLRKRSEYRDHVLPQL 233
>BT022240-1|AAY54656.1| 376|Drosophila melanogaster IP11466p
protein.
Length = 376
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 236 YDAKLFRKRVENLHYVLPQV 177
YD KL RKR E +VLPQ+
Sbjct: 214 YDRKLLRKRSEYRDHVLPQL 233
>AE013599-677|AAF59065.1| 382|Drosophila melanogaster CG8734-PA
protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 236 YDAKLFRKRVENLHYVLPQV 177
YD KL RKR E +VLPQ+
Sbjct: 220 YDRKLLRKRSEYRDHVLPQL 239
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,977,006
Number of Sequences: 53049
Number of extensions: 356920
Number of successful extensions: 775
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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