Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M11
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 28 2.0
U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase prote... 27 3.5
AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase pro... 27 3.5
Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical pr... 27 4.6
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 27 4.6
AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical ... 27 4.6
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 27 4.6
AC006677-4|AAF39949.1| 327|Caenorhabditis elegans Serpentine re... 27 6.1
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 26 8.1
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z83244-7|CAB05829.1| 318|Caenorhabditis elegans Hypothetical
protein W06F12.3 protein.
Length = 318
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 214 KGLRTFITFYPRCHPPLASPFREFWPMIRLTPPLPLTSLQGGIGF 80
+G++ +YP LA+PF E +I L P + + GG GF
Sbjct: 5 QGVQKNAEYYPAERGKLAAPFLETGTIIGLKRPFQVEKMVGGGGF 49
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 206 ENLHYVLPQVPSTIGKSIQGILAYDKTHTTASANITXRWNRVHFRQSPYEERT 48
+ + LPQ+P K + +LA TH++ S ++ NR + R++ + T
Sbjct: 912 DETQFKLPQLPMPPKKKVSPLLARQATHSSKSTTLSVP-NRANLRETKSIDET 963
>U80453-4|AAK31441.2| 674|Caenorhabditis elegans Trehalase protein
5 protein.
Length = 674
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 286 SSVPISIDLWSTITTLSTTPNYSAKGLRTFITFY 185
SS + ID+ +TITT S++ + + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669
>AJ512339-1|CAD54512.1| 674|Caenorhabditis elegans trehalase
protein.
Length = 674
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 286 SSVPISIDLWSTITTLSTTPNYSAKGLRTFITFY 185
SS + ID+ +TITT S++ + + T IT +
Sbjct: 636 SSTSLPIDITTTITTSSSSSTFGYSNILTLITVF 669
>Z77660-2|CAB01176.1| 361|Caenorhabditis elegans Hypothetical
protein F38H4.2 protein.
Length = 361
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -1
Query: 209 VENLHYVLPQVPSTIGKSIQGILAYDKTHTTASAN 105
++N +Y+ P +PST ++ +L + +H T + N
Sbjct: 214 IQNFNYLNPNLPSTGKMTLNELLLINSSHITLTFN 248
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 27.1 bits (57), Expect = 4.6
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = -1
Query: 302 ECGHLFVGTNINRPMV 255
+ GH+FVG +++RPM+
Sbjct: 73 DAGHMFVGVDVSRPML 88
>AL032644-3|CAA21668.1| 215|Caenorhabditis elegans Hypothetical
protein Y51H1A.3b protein.
Length = 215
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 316 LW*S*NAVTYSSVPISIDLWSTITTLSTTPNYSAKGLRTFITFYPRCHPPLASPFRE 146
+W V++S++ I L ++ ++ +G TF +YPR H P A P E
Sbjct: 7 IWQESCPVSFSALKKWIFLPNSTKIKEKRSSFPVRGPLTFDGWYPRDHKPSAPPTNE 63
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 172 PPLASPFREFWPMIRLTPPLPLTSLQGGIGFT 77
PP PF E P+I P+ + +L +G T
Sbjct: 28 PPEYGPFDEVEPLIEAEQPMKIRTLVAAVGLT 59
>AC006677-4|AAF39949.1| 327|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 58 protein.
Length = 327
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 298 AVTYSSVPISIDLWSTITTLSTTPNY 221
AVTY S+ I LWS I+ L+ N+
Sbjct: 240 AVTYGSIYTGILLWSIISALNANFNF 265
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 269 NRPMVYHHNAKYDAKLFRKRVENLHYVLPQVPSTI 165
N+ + +A ++ +LF++ + NL+ V PQ+P I
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNI 164
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 269 NRPMVYHHNAKYDAKLFRKRVENLHYVLPQVPSTI 165
N+ + +A ++ +LF++ + NL+ V PQ+P I
Sbjct: 130 NQNTINMMSAAFNQQLFKQTLANLNTVTPQLPVNI 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,637,471
Number of Sequences: 27780
Number of extensions: 176624
Number of successful extensions: 469
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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