Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_M02
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.41
SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr ... 27 2.2
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 2.9
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 27 2.9
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 27 2.9
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 5.1
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 26 5.1
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 6.7
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 25 8.9
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 25 8.9
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 25 8.9
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -1
Query: 499 VSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEF 371
+S L L QP+ V +LY A + M+ ++ +AI+ H+EF
Sbjct: 37 LSFLSLLQPDTVQRLYQCA--VPSMIYVPPMINEAISIQHEEF 77
>SPBC2G5.03 |||ATP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 335
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 368 GIPYMVVSFQNIQQPWTAEDKTWR-GITDVCRYRSVWRSKS 249
G+P +VS+ ++ WT ++ R G + C Y V+R ++
Sbjct: 112 GLPMKIVSYADLYDGWTMDNVVARIGTKNNCTYCGVFRRQA 152
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 86 LGSEARTLS*SLWSNICLNSSLXCVGIGI*HLEALVLDH 202
LG A LS LW + L ++ VGIGI L+ L +H
Sbjct: 2280 LGKGAPYLSRMLWLYLGLLDTVQTVGIGIILLQTLTREH 2318
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.1 bits (57), Expect = 2.9
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +2
Query: 317 LSRVVEYFERTQPYRVYLEFVVKERNRFLQE 409
L+ + + F R QPY++Y++ V++ L++
Sbjct: 919 LTHIGQAFSRDQPYKIYIQDVMRSTKDMLKK 949
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 2.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 296 LARFYLQLSRVVEYFERTQPYRVYLEFVVKERNRFLQELNW 418
LAR+ L LS V++Y ++ P + V++ FL +LN+
Sbjct: 593 LARYPLLLSGVLKYTDKDNPDTENIPRVIEMIREFLTKLNY 633
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.2 bits (55), Expect = 5.1
Identities = 9/41 (21%), Positives = 19/41 (46%)
Frame = -3
Query: 386 LSRRIRGIPYMVVSFQNIQQPWTAEDKTWRGITDVCRYRSV 264
L ++ +P+ + F+N +T + W + YR+V
Sbjct: 953 LHKKFDDLPFYCIGFKNATPEYTLRTRIWASLRSQTLYRTV 993
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 89 GSEARTLS*SLWSNICLNSSLXCVGIGI*HLEALVLDHEA 208
G + L+ S+W + L + VG+G+ L+ L DH A
Sbjct: 2240 GKASALLTKSVWLLLALWDGIQGVGVGVMLLQTLARDHVA 2279
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.8 bits (54), Expect = 6.7
Identities = 8/51 (15%), Positives = 23/51 (45%)
Frame = -3
Query: 416 N*ALGESDCVLSRRIRGIPYMVVSFQNIQQPWTAEDKTWRGITDVCRYRSV 264
N ++ E + ++ +P+ + F++ +T + W + YR++
Sbjct: 967 NDSVSEKEGTYKSKVDDLPFYCIGFKSAMPEYTLRTRIWASLRSQTLYRTI 1017
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 488 EVDAARSRHQVVQQGSRDTRHANTN 414
+VD RSR+Q + G D AN+N
Sbjct: 412 DVDVIRSRYQKLLSGDADDFQANSN 436
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +3
Query: 249 AFGTPYTP-----ISTNICDSSPGFIFSCPGLLNILK 344
+F T Y P + TNI D +PG + S L N+LK
Sbjct: 156 SFYTGYEPFDAERVFTNIDDLNPGKLISLQNLYNLLK 192
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 634 AIEYIPLRDYYHRHTRSLFWELQDIISF 551
A +YIP ++HR +R +W + ++ SF
Sbjct: 259 AADYIPSEGFHHRASR--YWPITNLDSF 284
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,238,309
Number of Sequences: 5004
Number of extensions: 68810
Number of successful extensions: 183
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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