Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_L22
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 373 e-104
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 373 e-104
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 200 1e-51
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 196 2e-50
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 30 1.6
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 30 2.1
AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical ... 29 4.9
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 28 6.5
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein
F25H5.4 protein.
Length = 852
Score = 373 bits (918), Expect = e-104
Identities = 166/204 (81%), Positives = 184/204 (90%)
Frame = -1
Query: 764 ARKIWXFGPEGTGPNXXVDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNIY 585
ARKIW FGP+GTGPN +D +KGVQYLNEIKDSVV GFQWA +EGV+++EN+RGVRFN++
Sbjct: 640 ARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVH 699
Query: 584 DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNR 405
DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNR
Sbjct: 700 DVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNR 759
Query: 404 RRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPC 225
RRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP
Sbjct: 760 RRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPL 819
Query: 224 EPQSKPYNVVQETRKRKGLKEGLP 153
E +KP +V +TRKRKGLKEG+P
Sbjct: 820 EAGTKPNQIVLDTRKRKGLKEGVP 843
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 373 bits (918), Expect = e-104
Identities = 166/204 (81%), Positives = 184/204 (90%)
Frame = -1
Query: 764 ARKIWXFGPEGTGPNXXVDCSKGVQYLNEIKDSVVXGFQWAXKEGVMAEENLRGVRFNIY 585
ARKIW FGP+GTGPN +D +KGVQYLNEIKDSVV GFQWA +EGV+++EN+RGVRFN++
Sbjct: 640 ARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVH 699
Query: 584 DVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNR 405
DVTLH DAIHRGGGQIIPT RR YA +LTA+PRL+EPVYL EIQCPE AVGGIYGVLNR
Sbjct: 700 DVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNR 759
Query: 404 RRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPC 225
RRGHVFEESQV GTPMF+VKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP
Sbjct: 760 RRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPL 819
Query: 224 EPQSKPYNVVQETRKRKGLKEGLP 153
E +KP +V +TRKRKGLKEG+P
Sbjct: 820 EAGTKPNQIVLDTRKRKGLKEGVP 843
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 200 bits (487), Expect = 1e-51
Identities = 97/217 (44%), Positives = 136/217 (62%), Gaps = 16/217 (7%)
Frame = -1
Query: 764 ARKIWXFGPEGTGPNXXVDCSKGVQY----LNEIKDSVVXGFQWAXKEGVMAEENLRGVR 597
AR IW FGP+ TGPN +D + + L+ +++S+V GFQWA +EG + EE +R V+
Sbjct: 733 ARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVK 792
Query: 596 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 417
F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y
Sbjct: 793 FKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYT 852
Query: 416 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 237
VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P
Sbjct: 853 VLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVP 912
Query: 236 GDPCEP---------QSKPY---NVVQETRKRKGLKE 162
GDP + Q P+ + +TR+RKGL E
Sbjct: 913 GDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 949
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 196 bits (477), Expect = 2e-50
Identities = 96/217 (44%), Positives = 135/217 (62%), Gaps = 16/217 (7%)
Frame = -1
Query: 764 ARKIWXFGPEGTGPNXXVDCSKGVQY----LNEIKDSVVXGFQWAXKEGVMAEENLRGVR 597
AR IW FG + TGPN +D + + L+ +++S+V GFQWA +EG + EE +R V+
Sbjct: 608 ARSIWAFGLDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVK 667
Query: 596 FNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYG 417
F + D + T+ ++RGGGQ+IPT RRC Y+ L A PRLMEP Y E+ P V +Y
Sbjct: 668 FKLLDAAIATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYT 727
Query: 416 VLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 237
VL +RRGHV ++ + G+PM+ + AY+PV +SFGF DLR +T GQAF F HWQ++P
Sbjct: 728 VLAKRRGHVTTDAPMPGSPMYTISAYIPVMDSFGFETDLRIHTQGQAFCMSAFHHWQLVP 787
Query: 236 GDPCEP---------QSKPY---NVVQETRKRKGLKE 162
GDP + Q P+ + +TR+RKGL E
Sbjct: 788 GDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSE 824
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein
K10C3.5a protein.
Length = 894
Score = 75.4 bits (177), Expect = 4e-14
Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Frame = -1
Query: 758 KIWXFGPEGTGPNXXVDCSKGVQY----------LNEIKDSVVXGFQWAXKEGVMAEENL 609
+IW FGPE N + + + ++V GF+ G + E +
Sbjct: 653 QIWAFGPERARANILFNNVQNYDRDSVWRKTEFGVRRYDQALVAGFELFCNTGPLCNEIM 712
Query: 608 RGVRFNI--YDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVA 435
G+ + ++V AI GGQ++ + A RL+ +Y C + A
Sbjct: 713 HGIAVIVEEWNVDEEDGAI---GGQMMTAIKASCSAAAKKLALRLVAAMYRCTVTTASQA 769
Query: 434 VGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFD 255
+G ++ VL++R+ V E T +F V + +PV ESF F LR T G A Q F
Sbjct: 770 LGKVHAVLSQRKSKVLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFS 829
Query: 254 HWQVLPGDP 228
HWQV+ DP
Sbjct: 830 HWQVIDEDP 838
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/55 (43%), Positives = 28/55 (50%)
Frame = -1
Query: 392 VFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 228
V E T +F V + +PV ESF F LR T G A Q F HWQV+ DP
Sbjct: 595 VLSEDINEATNLFEVVSLMPVVESFSFCDQLRKFTSGMASAQLQFSHWQVIDEDP 649
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 41.5 bits (93), Expect = 7e-04
Identities = 30/119 (25%), Positives = 52/119 (43%)
Frame = -1
Query: 635 EGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCE 456
EG + + + G+ I D + H A+ +I T + + A L+EP+ E
Sbjct: 593 EGPLIKSRIAGIHVRIQDGSTH--AVDSTEIAMINTMQNMMRESFEKANWLLLEPIMKVE 650
Query: 455 IQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQ 279
P G + L +R + G I +A P+++ FG+T++LRS T G+
Sbjct: 651 ATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVICEA--PLSDMFGYTSELRSLTEGK 707
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = -1
Query: 548 GGQIIPT-----TRRCLYACLLTAQPRLMEPVYLCEIQCP-EVAVGGIYGVLNRRRGHVF 387
GG+I P ++C+ L + + L EPV +I+ + I L RRR H
Sbjct: 565 GGKINPALLSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRAHFE 624
Query: 386 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 282
T + + A LP++E+ + +R+ T G
Sbjct: 625 HSDATESTEIRRICAILPLSETENLSKTVRTLTSG 659
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 4 LLSHLRVCFNMMRNMCC*K*TCVKRFPYRYVFLICFNYVV 123
+L+ LR+C+ C + TC K FP ++V L+ ++VV
Sbjct: 290 ILTPLRICYTSCLFQHC-QITCQKNFPTKFVDLLSLSHVV 328
>AF016661-4|AAB66050.2| 567|Caenorhabditis elegans Hypothetical
protein F02E11.1 protein.
Length = 567
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 237 REDLPMVEYALREGLSAGVGTQIGSKTERLID 332
+ED+ +EY + E ++ +GTQ+ KT +D
Sbjct: 232 QEDVTRIEYLIHEYQNSDIGTQMLKKTRTAVD 263
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -1
Query: 548 GGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRR 402
G Q + T RCL A +L + +M + + + A G ++ ++NR+
Sbjct: 1017 GDQTVDKTFRCLMAMMLCCEGIIMSAQFFPQFVGAKSAAGQMFNLINRQ 1065
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,960,295
Number of Sequences: 27780
Number of extensions: 428054
Number of successful extensions: 1054
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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