Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_L14
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112 p... 30 6.8
BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPa... 30 6.8
BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome, ma... 30 6.8
BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome, ma... 30 6.8
BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein. 30 6.8
BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein. 30 6.8
BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome (... 30 6.8
BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein. 30 6.8
BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for IM... 30 6.8
BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein. 30 6.8
BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein. 30 6.8
AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein. 30 6.8
>D44466-1|BAA07918.1| 953|Homo sapiens proteasome subunit p112
protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC114434-1|AAI14435.1| 953|Homo sapiens proteasome 26S non-ATPase
subunit 1 protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC112344-1|AAI12345.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC094720-1|AAH94720.1| 953|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 1 protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC073833-1|AAH73833.1| 865|Homo sapiens PSMD1 protein protein.
Length = 865
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC047897-1|AAH47897.1| 844|Homo sapiens PSMD1 protein protein.
Length = 844
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC039845-1|AAH39845.1| 825|Homo sapiens Similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 1 protein.
Length = 825
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC032445-1|AAH32445.1| 824|Homo sapiens PSMD1 protein protein.
Length = 824
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC020223-1|AAH20223.1| 856|Homo sapiens Unknown (protein for
IMAGE:5087823) protein.
Length = 856
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC014013-1|AAH14013.1| 848|Homo sapiens PSMD1 protein protein.
Length = 848
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>BC001053-1|AAH01053.1| 869|Homo sapiens PSMD1 protein protein.
Length = 869
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
>AC009407-1|AAX93127.1| 953|Homo sapiens unknown protein.
Length = 953
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Frame = +1
Query: 319 HLPCLVAILNLTQ------VMHIVTIIYSPFCIIRLVKLEKLRKV 435
H+P +V +L TQ + H +++ Y+P C+I L K K+ KV
Sbjct: 756 HMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKV 800
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,382,195
Number of Sequences: 237096
Number of extensions: 1587131
Number of successful extensions: 1862
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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