BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_L13
(807 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 29 0.22
AY735443-1|AAU08018.1| 163|Anopheles gambiae bursicon protein. 26 1.2
AY735442-1|AAU08017.1| 163|Anopheles gambiae bursicon protein. 26 1.2
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 25 2.1
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 28.7 bits (61), Expect = 0.22
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -2
Query: 632 WSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRT 453
+SK + S +P P T + S + QRP +LD P+++ +++C
Sbjct: 237 YSKKSTTVSYQPVPTGTPTRMLNGEPASQRPSSSQMQRPKVQQLDTAAAPTNHHLYRCPA 296
Query: 452 C 450
C
Sbjct: 297 C 297
>AY735443-1|AAU08018.1| 163|Anopheles gambiae bursicon protein.
Length = 163
Score = 26.2 bits (55), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 192 CA*TVPCEGKKYWTLQRICLC 130
CA + G K W ++R C+C
Sbjct: 67 CASYIQVSGSKIWQMERSCMC 87
>AY735442-1|AAU08017.1| 163|Anopheles gambiae bursicon protein.
Length = 163
Score = 26.2 bits (55), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 192 CA*TVPCEGKKYWTLQRICLC 130
CA + G K W ++R C+C
Sbjct: 67 CASYIQVSGSKIWQMERSCMC 87
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 25.4 bits (53), Expect = 2.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 682 YVLTIFTFLLSLSYXY 729
YVLT F F++S++Y Y
Sbjct: 6 YVLTAFVFVVSIAYLY 21
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,334
Number of Sequences: 2352
Number of extensions: 14288
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -