Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_K09
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   6.1  
DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    22   8.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   8.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   8.0  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 327 KKQKKTIESINSRLALVMK--SGKYCLGY 247
           +  K T+ES+ S+LAL +   +  Y LG+
Sbjct: 152 RDDKATLESMGSQLALALANLTANYQLGF 180


>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5
          protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 99 LGTACGKYYRVCTLA 55
          LGT  GK Y  C LA
Sbjct: 14 LGTCSGKIYNRCELA 28


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 29   CPSHQGSVMASVHTL*YFP 85
            CP+  GSV +  H L Y P
Sbjct: 947  CPACTGSVESVAHVLFYCP 965


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 292 PPCLGDEIGKILLRIQANFENSSTRQ 215
           P C+ D +GK+L R+  N  N    Q
Sbjct: 567 PLCMLDALGKVLERLILNRLNRHIEQ 592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,240
Number of Sequences: 2352
Number of extensions: 6308
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)