Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_K07
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0058 + 415145-415210,415888-415906,415971-416083,416495-41...    29   3.3  
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756...    28   5.8  
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597...    28   7.6  
06_01_0388 - 2773559-2773621,2774141-2774250,2774360-2774423,277...    28   7.6  
03_05_0717 + 27097367-27097621,27097744-27097866,27098136-270983...    28   7.6  

>05_01_0058 +
           415145-415210,415888-415906,415971-416083,416495-416572,
           416731-416975,417083-417188
          Length = 208

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 217 SEVLKIPTIFVENYGSIEGLRLGWEWYCHYPFVFLYVNLHY 95
           S  + IPTI  + Y  I G    WE Y   PF ++ V +H+
Sbjct: 11  STFMAIPTINFQMYSEIAGDDEWWE-YIPCPFCYIEVEVHF 50


>06_03_1344 -
           29472139-29473292,29474478-29475386,29475504-29475618,
           29476017-29476218,29477177-29477296,29477431-29477582,
           29478177-29478461
          Length = 978

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = -3

Query: 268 FVTIISIKTFPLNIFIKSEVLKIPTIFVENYGSIEGLRLGWEWYCHYPFVF 116
           FV ++S+K FP N+ + S       I        E  R GW+     PFVF
Sbjct: 788 FVDVLSVKEFPRNLLLGSLPPDFDVICTHPMFGPESARDGWD---GLPFVF 835


>09_06_0204 -
           21559024-21559287,21559445-21559567,21559665-21559718,
           21559800-21560721,21560803-21561212,21561284-21561408,
           21561524-21561571,21561668-21561789,21562008-21562099,
           21562242-21562429,21562582-21562696,21562780-21562863,
           21562994-21563087,21563393-21563510,21563805-21563930,
           21564002-21564074,21564209-21564296,21564674-21564744,
           21564839-21564918,21565004-21565065,21565169-21565310,
           21565410-21565510,21565600-21565644,21565725-21565789,
           21566088-21566163,21566246-21566300,21566416-21566773
          Length = 1366

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 208 LKIPTIFVENYGSIEGLRLGWEWYCHYPF 122
           +K+   + ++Y S + L  G EWYCH  F
Sbjct: 683 VKLKKRYNDSYKSSKDLLSGNEWYCHQAF 711


>06_01_0388 -
           2773559-2773621,2774141-2774250,2774360-2774423,
           2775102-2775282,2775355-2775455,2777340-2777426,
           2778028-2778140,2778430-2778679
          Length = 322

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 469 FFPPEFYFILIISYLTSNIEYYKEVNFKNLLMNIFSTKLII 591
           +F  E   +LIISY    I YY+ V  K    +I  + +++
Sbjct: 228 YFSIEDVMVLIISYCAERISYYRSVTKKEDHHSIIQSPILL 268


>03_05_0717 +
           27097367-27097621,27097744-27097866,27098136-27098303,
           27098393-27100072
          Length = 741

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 163 GLRLGWEWYCHYPFVFLYVNLHY 95
           G+ L  EW+  YP+VF Y N  Y
Sbjct: 162 GVVLDEEWHLSYPYVFTYKNKVY 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,811,337
Number of Sequences: 37544
Number of extensions: 265664
Number of successful extensions: 434
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)