Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_K05
         (687 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0389 - 8456957-8459917,8461941-8462267                           31   0.65 
01_04_0054 - 15456668-15459691                                         29   4.6  
07_03_0382 + 17470508-17470807,17471449-17474517                       28   8.0  

>09_02_0389 - 8456957-8459917,8461941-8462267
          Length = 1095

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 432 SLKNMYGLRSTQIMWLHRLANSASQVIRIRGLDIKASSPEIIQSIVQLLTWNDVAIGF 259
           SL N+  L      WL  L    S ++ +R LD++ ++P I+ S +  L       GF
Sbjct: 596 SLSNLQFLILRCCYWLETLPEEISNLVSLRSLDLEGTTPHIVLSRLSALEQLTALHGF 653


>01_04_0054 - 15456668-15459691
          Length = 1007

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
 Frame = -1

Query: 282  WNDVAIGFYPTSKSLFHYGVELPTSCTEKNSTTEPCEYVD---ITMKTDMV-GRLPI-TD 118
            +N+ A G+ P+SK  F Y +   T CTE ++       VD      K D V G L I T+
Sbjct: 905  YNNWAPGWVPSSKDTFEYTIGEITDCTEASTKVLLLTRVDGYRAVFKPDSVRGTLEIPTN 964

Query: 117  IYFKVNLMEKDLKISVEN-IKLC 52
               + + +    +++ EN  KLC
Sbjct: 965  ENIRFSHLIPSFRLTKENGGKLC 987


>07_03_0382 + 17470508-17470807,17471449-17474517
          Length = 1122

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 429 LKNMYGLRSTQIMWLHRLANSASQVIRIRGLDIKASS-PEIIQSIVQL 289
           L+N+  L      WLH L      + R++ LD++ +S  +++ S+V L
Sbjct: 610 LRNLQFLGLRYCNWLHTLPKGIGNLHRLQTLDLRGTSLHQVLPSLVNL 657


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,472,021
Number of Sequences: 37544
Number of extensions: 371048
Number of successful extensions: 921
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)