Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_K04
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.4  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.8  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -2

Query: 154 VCICLLVNTIFIGFLVVNEKIKMIIVKRCCD 62
           + + +LVN + +G LV++    +++VKR  D
Sbjct: 329 ILLRILVNFLILGLLVISAYEVILVVKRSMD 359


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 538 APPSNWKAASPAAGTSDASSSSPAK 612
           APP N+    P  G  +   S+P++
Sbjct: 380 APPRNFTMPGPGPGIGEREKSNPSR 404


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 559 AASPAAGTSDASSSSP 606
           AA+PAA T+ A+++SP
Sbjct: 226 AAAPAAATAHAATASP 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,167
Number of Sequences: 2352
Number of extensions: 11656
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)