Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_K02
         (773 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.6  
AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450 CY...    24   6.0  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 568 LAVFTMNTEE*IQCHFINN*FTRKTCIQSFMQISNNND 455
           LAV T+ +   +  H++     R T ++ F   SNNND
Sbjct: 10  LAVLTIASR--LVSHYLAGSLVRTTDVRQFWAFSNNND 45


>AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450
           CYP4H19 protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 659 NTPLVFN-Y*TIPYVHKVCKDRYNIRKNVIFIGCIYNEYRRMNSVSL 522
           + PL +N     PY+  V K+   +   V FIG    E  +MN V++
Sbjct: 48  HVPLTYNTLQNFPYLDMVVKESLRLLPPVSFIGRRLVEDIQMNGVTI 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,224
Number of Sequences: 2352
Number of extensions: 17875
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)