Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_J07
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130384-1|AAI30385.1| 306|Homo sapiens mitochondrial ribosomal... 227 3e-59
BC130382-1|AAI30383.1| 306|Homo sapiens mitochondrial ribosomal... 227 3e-59
AK172741-1|BAD18730.1| 306|Homo sapiens protein ( Homo sapiens ... 227 3e-59
BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarc... 31 4.5
AF324219-1|AAK08959.2| 553|Homo sapiens ASPL protein. 31 4.5
>BC130384-1|AAI30385.1| 306|Homo sapiens mitochondrial ribosomal
protein L45 protein.
Length = 306
Score = 227 bits (555), Expect = 3e-59
Identities = 100/218 (45%), Positives = 147/218 (67%)
Frame = -2
Query: 731 QKMKEKGVLPPRPWMERPXYIXXTGGVFEAYVPPEGDGKAXIVSTSRAKQTVELLEKKSK 552
Q ++ G++ P +R ++ T G+F+AYVPPEGD + +S + E ++K
Sbjct: 58 QHARKAGLVIPPEKSDRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMA 117
Query: 551 SMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRLYVTEKAYSEFRHNSH 372
S ++IR+IK +D ++ K F A+DI+I+AH L N+D L VTE + + +
Sbjct: 118 SQVSIRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK 177
Query: 371 LKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGSEI 192
KT+RW F+ESLEP VV RC+ ++++ N++GQ+TVR HTRQ LA+YDRFGRL++G E
Sbjct: 178 YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQED 237
Query: 191 LAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEP 78
+ KDVLEY+VFEK L+N YG+WR+H KI+P WAPPK+P
Sbjct: 238 VPKDVLEYVVFEKQLTNPYGSWRMHTKIVPPWAPPKQP 275
>BC130382-1|AAI30383.1| 306|Homo sapiens mitochondrial ribosomal
protein L45 protein.
Length = 306
Score = 227 bits (555), Expect = 3e-59
Identities = 100/218 (45%), Positives = 147/218 (67%)
Frame = -2
Query: 731 QKMKEKGVLPPRPWMERPXYIXXTGGVFEAYVPPEGDGKAXIVSTSRAKQTVELLEKKSK 552
Q ++ G++ P +R ++ T G+F+AYVPPEGD + +S + E ++K
Sbjct: 58 QHARKAGLVIPPEKSDRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMA 117
Query: 551 SMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRLYVTEKAYSEFRHNSH 372
S ++IR+IK +D ++ K F A+DI+I+AH L N+D L VTE + + +
Sbjct: 118 SQVSIRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK 177
Query: 371 LKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGSEI 192
KT+RW F+ESLEP VV RC+ ++++ N++GQ+TVR HTRQ LA+YDRFGRL++G E
Sbjct: 178 YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQED 237
Query: 191 LAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEP 78
+ KDVLEY+VFEK L+N YG+WR+H KI+P WAPPK+P
Sbjct: 238 VPKDVLEYVVFEKQLTNPYGSWRMHTKIVPPWAPPKQP 275
>AK172741-1|BAD18730.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ23902 fis, clone ADKA01604. ).
Length = 306
Score = 227 bits (555), Expect = 3e-59
Identities = 100/218 (45%), Positives = 147/218 (67%)
Frame = -2
Query: 731 QKMKEKGVLPPRPWMERPXYIXXTGGVFEAYVPPEGDGKAXIVSTSRAKQTVELLEKKSK 552
Q ++ G++ P +R ++ T G+F+AYVPPEGD + +S + E ++K
Sbjct: 58 QHARKAGLVIPPEKSDRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMA 117
Query: 551 SMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRLYVTEKAYSEFRHNSH 372
S ++IR+IK +D ++ K F A+DI+I+AH L N+D L VTE + + +
Sbjct: 118 SQVSIRRIKDYDANFKIKDFPGKAKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIK 177
Query: 371 LKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGSEI 192
KT+RW F+ESLEP VV RC+ ++++ N++GQ+TVR HTRQ LA+YDRFGRL++G E
Sbjct: 178 YKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQED 237
Query: 191 LAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEP 78
+ KDVLEY+VFEK L+N YG+WR+H KI+P WAPPK+P
Sbjct: 238 VPKDVLEYVVFEKQLTNPYGSWRMHTKIVPPWAPPKQP 275
>BC018722-1|AAH18722.1| 553|Homo sapiens alveolar soft part sarcoma
chromosome region, candidate 1 protein.
Length = 553
Score = 31.1 bits (67), Expect = 4.5
Identities = 28/101 (27%), Positives = 39/101 (38%)
Frame = -2
Query: 377 SHLKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGS 198
SHL F + PP+ V T + + N+F V + VY G L H
Sbjct: 422 SHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAI 481
Query: 197 EILAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEPS 75
A DVL +++S G+ PD AP EP+
Sbjct: 482 SPSAADVL----VARYMSRAAGS--PSPLPAPDPAPKSEPA 516
>AF324219-1|AAK08959.2| 553|Homo sapiens ASPL protein.
Length = 553
Score = 31.1 bits (67), Expect = 4.5
Identities = 28/101 (27%), Positives = 39/101 (38%)
Frame = -2
Query: 377 SHLKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGS 198
SHL F + PP+ V T + + N+F V + VY G L H
Sbjct: 422 SHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAI 481
Query: 197 EILAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEPS 75
A DVL +++S G+ PD AP EP+
Sbjct: 482 SPSAADVL----VARYMSRAAGS--PSPLPAPDPAPKSEPA 516
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,547,340
Number of Sequences: 237096
Number of extensions: 2111108
Number of successful extensions: 5620
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5620
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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