Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_J06
         (664 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1106 + 24017601-24019955                                         30   1.9  
02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434     29   2.5  
01_01_0860 - 6705087-6705490,6706900-6708573,6709714-6709801           29   3.3  
08_01_0198 + 1625893-1626795                                           28   7.6  
07_01_0026 + 190568-190829,192475-194534,194620-195168                 28   7.6  

>07_03_1106 + 24017601-24019955
          Length = 784

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 640 DEGVPVVTYYITQVTPASEPTYGELIPQYLSDHVVAKVGDLTYXYCIYGGTPLAHPSWSK 461
           +E + +V Y +TQ    +E TY  ++  Y       + G LT         P  HP +SK
Sbjct: 715 EEAIELVRYMVTQGCKPNERTYNSIVEGY------CRNGKLTDAKIFVSNLPQLHPGYSK 768


>02_04_0618 - 24428987-24429331,24429946-24430387,24433358-24433434
          Length = 287

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 460 PWTSLGGLGEFRHKCSIXTSDRQLSPPRGHSSTEGSALHTWAPRRESLA 606
           PW+  GG G  R   +  TSD  L PPR    T  + L      R S A
Sbjct: 60  PWSPSGGEGFRRLSSASPTSDPGLHPPRRRQPTCAAPLGAQVAARVSAA 108


>01_01_0860 - 6705087-6705490,6706900-6708573,6709714-6709801
          Length = 721

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 186 RGDGIPVALQGIVTSSPWV 242
           +GDG P+AL  I  +SPWV
Sbjct: 661 KGDGDPIALDAIDMTSPWV 679


>08_01_0198 + 1625893-1626795
          Length = 300

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 361 AGTYTCDVDNQAGRRLQHTITFSVVSAPTFT 269
           +GTY  DV   +G R QH      + +PTFT
Sbjct: 13  SGTYVLDVHGFSGLRRQHCGGGGCIVSPTFT 43


>07_01_0026 + 190568-190829,192475-194534,194620-195168
          Length = 956

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 628 PVVTYYITQVTPASEPTYGELIPQYLSDHVVAKVGDLT 515
           PV   Y+        P+YGEL+ +     + A VGD++
Sbjct: 513 PVPVSYVVVGDGVKNPSYGELVQRVAEGELDAAVGDIS 550


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,236,294
Number of Sequences: 37544
Number of extensions: 424584
Number of successful extensions: 1296
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)