Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_J04
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    25   1.8  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   3.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   3.2  

>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -3

Query: 275 QMYKDLYKNIFKVLDLHDKAILTMLTLKCNLSWIVDIAGILVTYILLSSFSKVSFIYL 102
           QM+  L K I ++L+   +++L +  L C L+W + +  +    I L S + V   +L
Sbjct: 250 QMHSGLLKCI-RLLNTSIRSMLMLQWLTCVLNWSISLIYLTNVGISLQSVTVVVMFFL 306


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 646 MPVMSEIIEILGTYIYI*ILFVGNLVVNRI 557
           MP  S+ + +LGTY    +  V + VV+ I
Sbjct: 267 MPATSDAVPLLGTYFNCIMFMVASSVVSTI 296


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 646 MPVMSEIIEILGTYIYI*ILFVGNLVVNRI 557
           MP  S+ + +LGTY    +  V + VV+ I
Sbjct: 299 MPATSDAVPLLGTYFNCIMFMVASSVVSTI 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,607
Number of Sequences: 2352
Number of extensions: 13673
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)