Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_J04
(733 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 26 0.42
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 25 0.73
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.73
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.73
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.97
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 5.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 5.2
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 5.2
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 9.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.0
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.0
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.8 bits (54), Expect = 0.42
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 578 SYKQNLNIYVRSEDFDNFRHYWHLCYK----LQLSHNTILVNLL 697
S+K+ +N Y ++D + F +Y K + + NT+ +N+L
Sbjct: 301 SFKRKVNFYPNNQDIEKFLNYLKRGGKTLTSISVESNTMFINIL 344
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 539 SMHSTLDSIYYQISYKQNLNIY 604
S ++ +SI + S K+NLN+Y
Sbjct: 625 SSKNSENSIMQRASMKENLNVY 646
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 25.0 bits (52), Expect = 0.73
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 626 NFRHYWHLCYKLQLSHNTILV 688
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 0.73
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 626 NFRHYWHLCYKLQLSHNTILV 688
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.73
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 626 NFRHYWHLCYKLQLSHNTILV 688
+FR YW LC L L N I++
Sbjct: 86 SFRFYWDLCMLLLLVANLIIL 106
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.6 bits (51), Expect = 0.97
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 646 MPVMSEIIEILGTYIYI*ILFVGNLVVNRI 557
MP S+ + +LGTY + V + VV+ I
Sbjct: 284 MPATSDAVPLLGTYFNCIMFMVASSVVSTI 313
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/56 (19%), Positives = 29/56 (51%)
Frame = +2
Query: 560 SIYYQISYKQNLNIYVRSEDFDNFRHYWHLCYKLQLSHNTILVNLLHIPGSTTIND 727
+++Y+ S ++ Y + + RH++H +++L IL + +H+ T ++
Sbjct: 130 TLHYR-SKRRGFVYYTMGQIREVARHFYHKELQIELVREEILFDTVHVTFKLTFDN 184
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 184 KLHFNVSIVNIALSCKSNTLKMFLYK 261
K+H N+ ++ S KS T +YK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYK 30
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.2 bits (45), Expect = 5.2
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 254 CINPYTFDNFKLW 292
C+NPY D+ W
Sbjct: 110 CVNPYDRDSLSCW 122
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 184 KLHFNVSIVNIALSCKSNTLKMFLYK 261
K+H N+ ++ S KS T +YK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYK 30
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +3
Query: 504 DDLKTNINLLQSVC 545
D+LK+ ++ +QSVC
Sbjct: 20 DELKSGLHTVQSVC 33
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +3
Query: 48 PLQLPYQIHTPYNTYRKLQINK 113
PL Y + YN Y K NK
Sbjct: 87 PLSNNYNYNNNYNNYNKHNYNK 108
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 69 IHTPYNTYRKLQINK*NFTE 128
IH N Y+KLQ N+ E
Sbjct: 90 IHNNNNNYKKLQYYNINYIE 109
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 69 IHTPYNTYRKLQINK*NFTE 128
IH N Y+KLQ N+ E
Sbjct: 90 IHNNNNNYKKLQYYNINYIE 109
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 69 IHTPYNTYRKLQINK*NFTE 128
IH N Y+KLQ N+ E
Sbjct: 90 IHNNNNNYKKLQYYNINYIE 109
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 69 IHTPYNTYRKLQINK*NFTE 128
IH N Y+KLQ N+ E
Sbjct: 90 IHNNNNNYKKLQYYNINYIE 109
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 541 YAQHTGFYLLPDFLQTKSKY 600
+ +HT +L PD+L +KY
Sbjct: 221 HLRHTKIWLRPDWLFNLTKY 240
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 69 IHTPYNTYRKLQINK*NFTE 128
IH N Y+KLQ N+ E
Sbjct: 323 IHNNNNNYKKLQYYNINYIE 342
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,471
Number of Sequences: 438
Number of extensions: 3983
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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