Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_J02
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical pr...    28   8.0  
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical...    28   8.0  

>Z83109-1|CAB05513.1|  339|Caenorhabditis elegans Hypothetical
           protein F44G3.1 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 517 SFSLITILYTCCYMWS 564
           SFS++ I+Y+CC  WS
Sbjct: 49  SFSVLGIIYSCCDFWS 64


>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
           protein Y67D8C.9 protein.
          Length = 1073

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -2

Query: 332 VGEISLNSLPFSSMKPNNMYTETIILIMLLMTSYRRIGSQIAVAVNRWFRKTRF 171
           V E++  S   SS  P N+YT+  +LI +L             AV R+ RK  +
Sbjct: 491 VRELATESQVESSFHPTNLYTKGCVLIRMLRDLVSDF--DFKAAVRRYLRKNAY 542


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,390,902
Number of Sequences: 27780
Number of extensions: 267935
Number of successful extensions: 348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)