Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_I24
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical pr... 31 0.78
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical ... 29 3.2
Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 28 7.3
U64860-1|AAB04991.1| 155|Caenorhabditis elegans Hypothetical pr... 28 7.3
U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical pr... 28 7.3
U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical p... 27 9.6
Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical pr... 27 9.6
U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical p... 27 9.6
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 9.6
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 9.6
U23486-4|AAC46776.2| 261|Caenorhabditis elegans Hypothetical pr... 27 9.6
U21310-5|AAY86191.1| 148|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine n... 27 9.6
AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho ... 27 9.6
AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-... 27 9.6
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1
Query: 476 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 360
R+ SI+FG GKK +KR + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629
>Z81594-6|CAJ85771.1| 153|Caenorhabditis elegans Hypothetical
protein T20F10.2c protein.
Length = 153
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 640 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 461
AA + N +PK+ DKQ +N+ + H E +V T QH ++ D++
Sbjct: 53 AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 110
Query: 460 TSVNEQE 440
T+V E
Sbjct: 111 TTVTSTE 117
>Z81594-5|CAJ85770.1| 262|Caenorhabditis elegans Hypothetical
protein T20F10.2b protein.
Length = 262
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 640 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 461
AA + N +PK+ DKQ +N+ + H E +V T QH ++ D++
Sbjct: 162 AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 219
Query: 460 TSVNEQE 440
T+V E
Sbjct: 220 TTVTSTE 226
>Z81594-4|CAB04747.1| 282|Caenorhabditis elegans Hypothetical
protein T20F10.2a protein.
Length = 282
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -2
Query: 640 AAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQL 461
AA + N +PK+ DKQ +N+ + H E +V T QH ++ D++
Sbjct: 182 AAHLNNLTPKIEKPKDKQAEEQNAEEQH--KEKEVTVTTVTTQHSREEAQVKEDNQAQST 239
Query: 460 TSVNEQE 440
T+V E
Sbjct: 240 TTVTSTE 246
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -2
Query: 553 FNEAQVIGTWHP-QQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
F E ++ +P Q + + F S+C S + + +K+ + N++D KWEN+
Sbjct: 23 FEETYLLKRVNPFAQTEEGRIIKFNSSDCPCGKSQDVHNISAMKDQLSNFLD--KWENVH 80
Query: 376 LRMQIPCPSDKHNVTK 329
+ +P S + +K
Sbjct: 81 EKFSLPTGSSELTTSK 96
>Z81085-2|CAB03114.2| 618|Caenorhabditis elegans Hypothetical
protein F46F3.2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 1.8
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = -2
Query: 499 KTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKW---ENLTLRMQIPCPS---DKHN 338
+TY + D E +L N +E E IG +D++ + +++ + M C S D+
Sbjct: 137 QTYNYSDPEVQELVLNNYEEAQE--NAIG--IDQLLFLDHQSVMIVMPAACNSSNSDEKE 192
Query: 337 VTKDYYLERLEGDGFYRTLNMPPPTAKLEFGVFRRYPIRLKIIENEYLGI 188
++K YYLE+ GD + N+ KL V P L I N+ LG+
Sbjct: 193 ISKQYYLEKY-GDFSFNVSNLNIELDKLHEMVHDFKP--LDQIMNQNLGL 239
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -2
Query: 691 SDVNMSPQRRCILIVLLAAGVINASPKVNDVHDKQQ----NCENSPQGHVFNEAQVIGTW 524
++ NM ++ ++ + + V K++++ D ++ N ENS +G NE +++ T
Sbjct: 148 TETNMKTEKPDKGVLKILSPVFEDITKIDNISDSEEVLRVNSENSVEGSGDNEPELMTTL 207
Query: 523 HPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 416
SKK+ F + + +SV + E I
Sbjct: 208 ETTTTSSKKSSEFTTTMTPESSSVTTTTAKPVTEPI 243
>AF067609-5|AAC17534.1| 644|Caenorhabditis elegans Hypothetical
protein C23H5.7 protein.
Length = 644
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 544 AQVIGTWHPQQHK-SKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLTLRM 368
A +IG+W P QHK S K+ G V S Q NE ++M+ MK+ + +
Sbjct: 317 ATIIGSWLPTQHKNSPKSEISGVGSVVTQMS---QTVNEFRQMMDGIKFYMKYREVNSAI 373
Query: 367 Q 365
Q
Sbjct: 374 Q 374
>Z22180-7|CAE17863.1| 372|Caenorhabditis elegans Hypothetical
protein K11H3.7 protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 558 WPCGEFSQFCCLSCTSLTFGDAFITPAANNT 650
W E FC +S T++ FGD F + + +NT
Sbjct: 291 WTFLESFYFCFISLTTIGFGDKFPSTSVSNT 321
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 391 WENLTLRMQIPCPSDKHNVTK 329
WE L LR +P P+D++ +TK
Sbjct: 123 WEQLLLRKLLPSPADRNMLTK 143
>U64860-1|AAB04991.1| 155|Caenorhabditis elegans Hypothetical
protein R106.1 protein.
Length = 155
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 504 DLCCCGCHVPITWASLKTWPCGE-FSQFCCLSCT 602
D CCCG H P A L F F CL C+
Sbjct: 53 DQCCCGDHAPSLSAMLPVLISRHIFYTFLCLLCS 86
>U50310-4|ABB51170.1| 409|Caenorhabditis elegans Hypothetical
protein ZC487.1b protein.
Length = 409
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 391 WENLTLRMQI-PCPSDKHNVTKDYYL 317
WE +TL Q+ P P D N+ K+Y+L
Sbjct: 278 WEVMTLTAQLGPQPEDVDNIDKNYHL 303
>U50310-3|AAA92540.4| 411|Caenorhabditis elegans Hypothetical
protein ZC487.1a protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 391 WENLTLRMQI-PCPSDKHNVTKDYYL 317
WE +TL Q+ P P D N+ K+Y+L
Sbjct: 280 WEVMTLTAQLGPQPEDVDNIDKNYHL 305
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 367 QIPCPSDKHNVTKDYYLERLEGDG 296
+IP PS +H K +LERL+G G
Sbjct: 888 RIPTPSSRHGNEKRGWLERLKGIG 911
>Z68159-10|CAD30432.1| 826|Caenorhabditis elegans Hypothetical
protein C33D9.1b protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 484 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
G CV+L + ++E+N+ + I + +D+ K +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621
>Z68159-9|CAA92282.2| 844|Caenorhabditis elegans Hypothetical
protein C33D9.1a protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 484 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
G CV+L + ++E+N+ + I + +D+ K +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621
>U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical
protein F45E4.7b protein.
Length = 505
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/89 (24%), Positives = 33/89 (37%)
Frame = -2
Query: 556 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
V N + W+ +Q+ +G ECV S E R + +D K +
Sbjct: 173 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 232
Query: 376 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 290
++I S H T YL + GFY
Sbjct: 233 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 260
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/89 (24%), Positives = 33/89 (37%)
Frame = -2
Query: 556 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
V N + W+ +Q+ +G ECV S E R + +D K +
Sbjct: 452 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 511
Query: 376 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 290
++I S H T YL + GFY
Sbjct: 512 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 539
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/89 (24%), Positives = 33/89 (37%)
Frame = -2
Query: 556 VFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
V N + W+ +Q+ +G ECV S E R + +D K +
Sbjct: 536 VANYLLTVTVWNLKQYSYSPRDQYGWRECVDQISSFEIGRKMYVDKASQTIDLPKIQEFL 595
Query: 376 LRMQIPCPSDKHNVTKDYYLERLEGDGFY 290
++I S H T YL + GFY
Sbjct: 596 QNLKIDFLS-VHRSTPLQYLSNINRLGFY 623
>U23486-4|AAC46776.2| 261|Caenorhabditis elegans Hypothetical
protein F07F6.2 protein.
Length = 261
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = -1
Query: 623 RVSESQRCTRQAAKL*KFSARPRLQRSPGYWHMAPATTQIKENLRIRGLRMCSINFGQRT 444
R+ + RQ K + + R + WH+ A +K + GL+ + F ++
Sbjct: 156 RIPSKEEVDRQTLKFKEEARRIKRLMIEEDWHVKEANEDVKNKIEQEGLKRKDMEFEEQL 215
Query: 443 GKKRI---KRNDRELRRQNE 393
RI KR ++ L+++ E
Sbjct: 216 YHLRIEKVKRREQVLKQKLE 235
>U21310-5|AAY86191.1| 148|Caenorhabditis elegans Hypothetical
protein F40H6.6 protein.
Length = 148
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -2
Query: 616 PKVNDVHD----KQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD 479
PK+ND+ D K +NCE+ + QV GT P+ + GD
Sbjct: 22 PKMNDIIDWKTWKTRNCESRRNPSFYRHRQVAGTVAPKAPLIHHNHHTGD 71
>AF339059-1|AAL50361.1| 826|Caenorhabditis elegans Rho guanine
nucleotide exchangefactor FGD-1 protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 484 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
G CV+L + ++E+N+ + I + +D+ K +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621
>AF326352-1|AAL50355.1| 844|Caenorhabditis elegans putative Rho
guanine nucleotideexchange factor FGD-1 protein.
Length = 844
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 484 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
G CV+L + ++E+N+ + I + +D+ K +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621
>AB060647-1|BAB43906.1| 826|Caenorhabditis elegans putative GDP-GTP
exchange factor protein.
Length = 826
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -2
Query: 484 GDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLT 377
G CV+L + ++E+N+ + I + +D+ K +LT
Sbjct: 586 GPKRCVELFTPTQKEKNDWVDSIFSIIDEAKAHSLT 621
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,023,952
Number of Sequences: 27780
Number of extensions: 359140
Number of successful extensions: 1058
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -