Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_I17
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribo... 33 0.20
AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribo... 33 0.20
Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical pr... 31 0.80
AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribo... 31 0.80
AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribo... 31 0.80
AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical... 31 1.1
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 30 1.4
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 30 1.4
AL117202-21|CAB55087.1| 370|Caenorhabditis elegans Hypothetical... 30 1.9
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 29 3.2
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF047660-9|AAC04433.3| 339|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 29 4.3
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 29 4.3
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 29 4.3
AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen pro... 29 4.3
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 28 5.7
>AF548468-1|AAN40699.1| 485|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme 4 protein.
Length = 485
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G+ + TFGD +L ++ V GQL+
Sbjct: 396 WGCGAFRGNKPLKFLIQVIACGISDRPLQFCTFGDTELAKKCEEMMTLFRNNNVRTGQLF 455
Query: 525 RLI 517
+I
Sbjct: 456 LII 458
>AC006662-4|AAF39896.2| 485|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 4 protein.
Length = 485
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G+ + TFGD +L ++ V GQL+
Sbjct: 396 WGCGAFRGNKPLKFLIQVIACGISDRPLQFCTFGDTELAKKCEEMMTLFRNNNVRTGQLF 455
Query: 525 RLI 517
+I
Sbjct: 456 LII 458
>Z68161-8|CAH60763.1| 625|Caenorhabditis elegans Hypothetical
protein F20C5.1c protein.
Length = 625
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G + +FG+ +L + + + VT+G L+
Sbjct: 523 WGCGAFNGDKPLKFIIQVIAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLF 582
Query: 525 RLI 517
+I
Sbjct: 583 SMI 585
>Z68161-5|CAA92299.2| 764|Caenorhabditis elegans Hypothetical
protein F20C5.1b protein.
Length = 764
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G + +FG+ +L + + + VT+G L+
Sbjct: 662 WGCGAFNGDKPLKFIIQVIAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLF 721
Query: 525 RLI 517
+I
Sbjct: 722 SMI 724
>Z68161-4|CAD89735.1| 781|Caenorhabditis elegans Hypothetical
protein F20C5.1a protein.
Length = 781
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G + +FG+ +L + + + VT+G L+
Sbjct: 679 WGCGAFNGDKPLKFIIQVIAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLF 738
Query: 525 RLI 517
+I
Sbjct: 739 SMI 741
>AY185494-1|AAO26317.1| 764|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 short form protein.
Length = 764
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G + +FG+ +L + + + VT+G L+
Sbjct: 662 WGCGAFNGDKPLKFIIQVIAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLF 721
Query: 525 RLI 517
+I
Sbjct: 722 SMI 724
>AY185493-1|AAO26316.1| 781|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-3 long form protein.
Length = 781
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/63 (23%), Positives = 25/63 (39%)
Frame = -1
Query: 705 WGCGAFGGSPRXXXXXXXXXXXXXXXXXAYFTFGDAQLRDHIVDVYNALAKCGVTVGQLY 526
WGCGAF G + +FG+ +L + + + VT+G L+
Sbjct: 679 WGCGAFNGDKPLKFIIQVIAAGVADRPLHFCSFGEPELAAKCKKIIERMKQKDVTLGMLF 738
Query: 525 RLI 517
+I
Sbjct: 739 SMI 741
>AF067219-15|AAC17023.2| 802|Caenorhabditis elegans Hypothetical
protein R12E2.2 protein.
Length = 802
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1
Query: 279 IKIDKSDPSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASR-DGDL 103
+KI+K+ S N ++L + LF+ Q EE N M +++ E+N SR D L
Sbjct: 721 LKIEKT--SSNRSAMTELETALANLFEAQQTRIEEQFEQNQKMLRDALSERNGSRFDDTL 778
Query: 102 PKRPADATSE 73
++++SE
Sbjct: 779 SVEDSESSSE 788
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -1
Query: 327 STDSPDLFSTDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDE---MQKLDEEDGLT-N 160
+TD+ + +ST E+ ++ G H T++L +E + DEE T +
Sbjct: 734 TTDAENSWSTSAKPQEVGAKRTTSESKLGLHGGSDRTTAELKEESVAFSESDEESDTTED 793
Query: 159 LSMPQESPLEQNASRDGDLPKR 94
S ESP + S D PK+
Sbjct: 794 SSSSDESPSSSSGSSIDDEPKK 815
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
protein F46C3.1 protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -1
Query: 327 STDSPDLFSTDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDE---MQKLDEEDGLT-N 160
+TD+ + +ST E+ ++ G H T++L +E + DEE T +
Sbjct: 734 TTDAENSWSTSAKPQEVGAKRTTSESKLGLHGGSDRTTAELKEESVAFSESDEESDTTED 793
Query: 159 LSMPQESPLEQNASRDGDLPKR 94
S ESP + S D PK+
Sbjct: 794 SSSSDESPSSSSGSSIDDEPKK 815
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
kinase protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -1
Query: 327 STDSPDLFSTDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDE---MQKLDEEDGLT-N 160
+TD+ + +ST E+ ++ G H T++L +E + DEE T +
Sbjct: 734 TTDAENSWSTSAKPQEVGAKRTTSESKLGLHGGSDRTTAELKEESVAFSESDEESDTTED 793
Query: 159 LSMPQESPLEQNASRDGDLPKR 94
S ESP + S D PK+
Sbjct: 794 SSSSDESPSSSSGSSIDDEPKK 815
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = -1
Query: 327 STDSPDLFSTDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDE---MQKLDEEDGLT-N 160
+TD+ + +ST E+ ++ G H T++L +E + DEE T +
Sbjct: 734 TTDAENSWSTSAKPQEVGAKRTTSESKLGLHGGSDRTTAELKEESVAFSESDEESDTTED 793
Query: 159 LSMPQESPLEQNASRDGDLPKR 94
S ESP + S D PK+
Sbjct: 794 SSSSDESPSSSSGSSIDDEPKK 815
>AL117202-21|CAB55087.1| 370|Caenorhabditis elegans Hypothetical
protein Y47D3A.27 protein.
Length = 370
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/68 (27%), Positives = 26/68 (38%)
Frame = -1
Query: 231 QLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASRDGDLPKRPADATSELKARVNR 52
QL S DE+ +E T + +P+EQ D K A E K V
Sbjct: 253 QLQKMISTAADELDMFSDEPTSTGAARAAGAPMEQEEEEADDSVKWEYKANEEAKIEVEY 312
Query: 51 KITDYFSK 28
+ TD F +
Sbjct: 313 EKTDDFGE 320
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Frame = -1
Query: 414 ERMETDSTPGTSTMELSDSLQT--ELLKEFTSTDSPDLFSTDESLIEIKIDKSDPSDNTG 241
E +ET G E+ +S T E K+F + + FS E++ + + D SDN
Sbjct: 214 EVVETSYGDGYQEDEIIESTCTFTETAKDFQAANKHQTFSKQENVEDTIFEDMDQSDNQE 273
Query: 240 CHSQLSNC--TSKLFDEMQKLDEEDGLTNLSMPQESPLEQNAS 118
L +E++KLD L + E P +++ S
Sbjct: 274 KSELLDEVENVEATANELEKLDVSIDLELNILSSEQPRDESRS 316
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical protein
C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = -1
Query: 303 STDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLT-NLSMPQESPLEQ 127
++D +++ I+ S D+ S++ T KL E+ KL + G+T +LS +E P
Sbjct: 977 NSDNIMLKYAIELS-LLDSKKDSSKIEAITKKLTLELAKL--KLGITQSLSDSKEDPSTN 1033
Query: 126 NASRDGDLPKRPADATSELKARVNRKITDYFSKKTCLKV 10
AS + DLP + T + R R ++ +K L +
Sbjct: 1034 EASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = -1
Query: 303 STDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLT-NLSMPQESPLEQ 127
++D +++ I+ S D+ S++ T KL E+ KL + G+T +LS +E P
Sbjct: 977 NSDNIMLKYAIELS-LLDSKKDSSKIEAITKKLTLELAKL--KLGITQSLSDSKEDPSTN 1033
Query: 126 NASRDGDLPKRPADATSELKARVNRKITDYFSKKTCLKV 10
AS + DLP + T + R R ++ +K L +
Sbjct: 1034 EASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = -1
Query: 303 STDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLT-NLSMPQESPLEQ 127
++D +++ I+ S D+ S++ T KL E+ KL + G+T +LS +E P
Sbjct: 977 NSDNIMLKYAIELS-LLDSKKDSSKIEAITKKLTLELAKL--KLGITQSLSDSKEDPSTN 1033
Query: 126 NASRDGDLPKRPADATSELKARVNRKITDYFSKKTCLKV 10
AS + DLP + T + R R ++ +K L +
Sbjct: 1034 EASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical protein
C18D4.2a protein.
Length = 1817
Score = 29.1 bits (62), Expect = 3.2
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = -1
Query: 303 STDESLIEIKIDKSDPSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLT-NLSMPQESPLEQ 127
++D +++ I+ S D+ S++ T KL E+ KL + G+T +LS +E P
Sbjct: 977 NSDNIMLKYAIELS-LLDSKKDSSKIEAITKKLTLELAKL--KLGITQSLSDSKEDPSTN 1033
Query: 126 NASRDGDLPKRPADATSELKARVNRKITDYFSKKTCLKV 10
AS + DLP + T + R R ++ +K L +
Sbjct: 1034 EASPEDDLPSTSDNRTPTSRERSERSESNIDNKMNKLTI 1072
>AF047660-9|AAC04433.3| 339|Caenorhabditis elegans Hypothetical
protein T09A12.1 protein.
Length = 339
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = -1
Query: 444 EVDKLRGTQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKIDK 265
E K+R ++ ++ E P E+ S+ + +E SP DE+ +E KID
Sbjct: 102 EDKKMRDSERQKREKKEVP----KEMRQSMMGSVFEEIEGPVSPAPLEKDENKMEWKID- 156
Query: 264 SDPSDNTGCHSQLSNCTSKLFD 199
DP TG ++S+ K+ D
Sbjct: 157 VDPVVLTG-DQRMSDVLGKMKD 177
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = -1
Query: 450 DGEVDKLRGTQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKI 271
DG + G E +D+ + E + + + E +T +P+ + D S +
Sbjct: 140 DGGGEAEEGEYEEENGSDAEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVS--DNIE 197
Query: 270 DKSDPSDNTGCHS-QLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASRDGDL 103
D D + HS + + +S LF++ + + + LS P P+EQ + D ++
Sbjct: 198 DDEDARPKSEEHSPKHAASSSDLFEDDDQSTTLESIARLSAPAHVPIEQPQTSDTEI 254
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = -1
Query: 450 DGEVDKLRGTQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKI 271
DG + G E +D+ + E + + + E +T +P+ + D S +
Sbjct: 140 DGGGEAEEGEYEEENGSDAEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVS--DNIE 197
Query: 270 DKSDPSDNTGCHS-QLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASRDGDL 103
D D + HS + + +S LF++ + + + LS P P+EQ + D ++
Sbjct: 198 DDEDARPKSEEHSPKHAASSSDLFEDDDQSTTLESIARLSAPAHVPIEQPQTSDTEI 254
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = -1
Query: 450 DGEVDKLRGTQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKI 271
DG + G E +D+ + E + + + E +T +P+ + D S +
Sbjct: 140 DGGGEAEEGEYEEENGSDAEEEEESPEKVEPATSTITTEAQTTTTPEEVTQDVS--DNIE 197
Query: 270 DKSDPSDNTGCHS-QLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASRDGDL 103
D D + HS + + +S LF++ + + + LS P P+EQ + D ++
Sbjct: 198 DDEDARPKSEEHSPKHAASSSDLFEDDDQSTTLESIARLSAPAHVPIEQPQTSDTEI 254
>AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen
protein 46 protein.
Length = 302
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 598 RVAEREVSEGPPGLRGRHRLQETLEPRGAP 687
RV E +GPPG+ GR L T GAP
Sbjct: 96 RVCECRHPQGPPGIPGRDGLPGTKGSEGAP 125
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/142 (19%), Positives = 63/142 (44%), Gaps = 3/142 (2%)
Frame = -1
Query: 594 LRDHIVDVYNALAKCGVTVGQLYRLI--VRFSKTNVLRSDLYDFLHQVLRD-GEVDKLRG 424
LR +++ +++LA + G L L ++ S+T+ L S + + E ++
Sbjct: 240 LRGKLLEDHHSLAYYNIQEGALIWLYSHLKMSETSSLMSQFQKLRVETSKIYNEFTEM-- 297
Query: 423 TQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKIDKSDPSDNT 244
++E + T ++ D Q E+ +EF + ++ + E+K K++ ++
Sbjct: 298 VKNETSDMKKQQETQILKEQDEFQDEIRQEFLKIQENENKLIEKLMSELKTLKTELNETK 357
Query: 243 GCHSQLSNCTSKLFDEMQKLDE 178
S L N T + + Q +++
Sbjct: 358 NQISDLHNATKQQESQAQSMND 379
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 28.3 bits (60), Expect = 5.7
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Frame = -1
Query: 435 KLRGTQHERMETDSTPGTSTMELSDSLQTELLKEFTSTDSPDLFSTDESLIEIKIDKSDP 256
K+ + + + +S S L+D+ E F T L D E+K+ K+
Sbjct: 653 KMEREKSRKADEESQNAWSLQALADN---ETFTRFCQTVDGVLEQGDSLDTELKMPKNKK 709
Query: 255 SDNTGCHSQLSNCTSKLFDEMQKLDEEDGLTNLSMPQESPLEQNASR---DGDLPKRPAD 85
+ G H + S DE +++DE D + + L + ++R + L AD
Sbjct: 710 RRSGGDHHHKGDENSDESDEEEEMDEIDPDLRIELYILEELRRGSARLRENHALQAVGAD 769
Query: 84 ATSELKARVNRKITDYFS 31
+L A ++R I D S
Sbjct: 770 KLLKLVAMLDRNIRDAIS 787
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,139,619
Number of Sequences: 27780
Number of extensions: 291654
Number of successful extensions: 1207
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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