Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_I17
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 574  VDDVVPELRVAEREVSEGPPG 636
            +D++ P  R   R ++EGP G
Sbjct: 969  IDELKPATRYTIRVIAEGPAG 989


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 574  VDDVVPELRVAEREVSEGPPG 636
            +D++ P  R   R ++EGP G
Sbjct: 965  IDELKPATRYTIRVIAEGPAG 985


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 CCHSDRSYRF*SRLNFRQSRIGPV 317
           CC SDR   F + L +  S + P+
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPL 379


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 CCHSDRSYRF*SRLNFRQSRIGPV 317
           CC SDR   F + L +  S + P+
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPL 379


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 CCHSDRSYRF*SRLNFRQSRIGPV 317
           CC SDR   F + L +  S + P+
Sbjct: 356 CCPSDRMVYFITWLGYVNSALNPL 379


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 258 PSDNTGCHSQLSNCTSKLFDEMQKLDEEDGLTNLSMPQESP 136
           P+ +T     LS C S + +    + +     NLS    SP
Sbjct: 844 PASSTAATLVLSGCPSNMMELQVDIADSQQPLNLSKKSPSP 884



 Score = 21.4 bits (43), Expect = 8.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 126 SVPEATLGA*TSSSARLPHPASASRQT 206
           S P     A TSS++  P PAS++  T
Sbjct: 825 SSPRYLSAAATSSTSTSPRPASSTAAT 851


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,761
Number of Sequences: 438
Number of extensions: 3609
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)