Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_I13
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-8|CAM84731.1|  892|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AL032659-3|CAA21749.2|  892|Caenorhabditis elegans Hypothetical ...    31   0.94 
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z83216-3|CAB05674.2|  232|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z66564-8|CAM84731.1|  892|Caenorhabditis elegans Hypothetical
           protein Y71H9A.1 protein.
          Length = 892

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 352 VFYYYLFLCTCQYLRYE--YDYHKSLYLLNCN 263
           V + ++FLC   +LR+E  +DY KS Y   C+
Sbjct: 500 VAFGWMFLCAAIFLRFEKDWDYFKSFYFFFCS 531


>AL032659-3|CAA21749.2|  892|Caenorhabditis elegans Hypothetical
           protein Y71H9A.1 protein.
          Length = 892

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 352 VFYYYLFLCTCQYLRYE--YDYHKSLYLLNCN 263
           V + ++FLC   +LR+E  +DY KS Y   C+
Sbjct: 500 VAFGWMFLCAAIFLRFEKDWDYFKSFYFFFCS 531


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
           protein T21E8.2 protein.
          Length = 1263

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -2

Query: 340 YLFLCTCQYLRYEYDYHKSLYLLNCNTLDVKLYFNSQCYILRLIRKSRIFKD 185
           Y FLC C Y  +    H  +  +  NT     Y   + YI RL+RK   + D
Sbjct: 105 YFFLCGCAYFTFASIQHAIMKYVGDNT----TYRVRKQYISRLLRKDAEYFD 152


>AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical
           protein C33E10.8 protein.
          Length = 303

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 150 ANCVLGKLNARLYNNYYRTNNVFLSTLLFHY 58
           AN  L  L  +LYN  YR  + F   LL  Y
Sbjct: 236 ANGQLSSLRVKLYNRLYRNTDQFFFVLLVDY 266


>Z83216-3|CAB05674.2|  232|Caenorhabditis elegans Hypothetical
           protein C08F11.3 protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 367 SFFMIVFYYYLFLCTCQYLRYEYDYHKSL 281
           S F+ VF   LFL    ++R+EY Y KS+
Sbjct: 92  SEFLTVFCCILFLPVTLHMRFEYFYKKSV 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,797,356
Number of Sequences: 27780
Number of extensions: 216574
Number of successful extensions: 594
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)